PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA13158.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

GeBP

Protein Properties

Length: 434aa MW: 48305.5 Da PI: 5.0923

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA13158.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	112.2	3.3e-35	198	292	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 fqrlws++Deiv+L+G+ d+ k+g +p++d+d+f + +kksi+++v+++ql +KirrLKkK+ ++vk+ k+g++p+fsk+hd k+fel k iWg OVA13158.1 198 PFQRLWSDDDEIVILKGMSDC-IKKGIDPTSDLDEFLDSIKKSIHVNVNRDQLNNKIRRLKKKYLNNVKRGKEGEDPVFSKPHDLKSFELMKEIWG 292 59*****************.899********************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence
MAPKRSSLLE DPPAASSSEE EVESEEEEEE DEEEEPAAEG GAADYESDSS DFDKSPKKPN 60 LNAAPKPQTP SSSDSDNDDE DGNESDSDDF DKSPKKPKPS DLYRTSTPIV KPKPITETPK 120 PKKTVAKPTA STATSAPAKP SAAGKRPLES EKAEKEKEKD SKRKKKKVGD GEDEDDSHPK 180 EGENKSFEDF MIQDHKNPFQ RLWSDDDEIV ILKGMSDCIK KGIDPTSDLD EFLDSIKKSI 240 HVNVNRDQLN NKIRRLKKKY LNNVKRGKEG EDPVFSKPHD LKSFELMKEI WGGQDSKEGK 300 SKKSAEANNG NDDSTLTNGK RSRNPKPRSG AASPKPKTIA LADIPTKESP KLEEKNWSLY 360 PCLYESLRSN KNSTKVGESL LKEGLSSIGE SKAKELEQKW RKLQAAELEI HLKRVELERE 420 QMMAVLNALK PSDS

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence

MAPKRSSLLE DPPAASSSEE EVESEEEEEE DEEEEPAAEG GAADYESDSS DFDKSPKKPN  60
LNAAPKPQTP SSSDSDNDDE DGNESDSDDF DKSPKKPKPS DLYRTSTPIV KPKPITETPK  120
PKKTVAKPTA STATSAPAKP SAAGKRPLES EKAEKEKEKD SKRKKKKVGD GEDEDDSHPK  180
EGENKSFEDF MIQDHKNPFQ RLWSDDDEIV ILKGMSDCIK KGIDPTSDLD EFLDSIKKSI  240
HVNVNRDQLN NKIRRLKKKY LNNVKRGKEG EDPVFSKPHD LKSFELMKEI WGGQDSKEGK  300
SKKSAEANNG NDDSTLTNGK RSRNPKPRSG AASPKPKTIA LADIPTKESP KLEEKNWSLY  360
PCLYESLRSN KNSTKVGESL LKEGLSSIGE SKAKELEQKW RKLQAAELEI HLKRVELERE  420
QMMAVLNALK PSDS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	157	166	KEKDSKRKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G11510.1	3e-24	GeBP family protein