PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA12908.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

TCP

Protein Properties

Length: 514aa MW: 53686.1 Da PI: 7.6746

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA12908.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	131.1	1.1e-40	160	255	2	103
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksaakskk 99 +++k++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pai+++tgt++++a+++ ++s +ss+s+ s++ +sk+ OVA12908.1 160 TVAKRSSKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFStLNVSLRSSGSTISAP-------PSKS 251 6789*****************************************************************9997777777777733332.......2222 PP TCP 100 sqks 103 ++s OVA12908.1 252 VSHS 255 2222 PP

Sequence ? help Back to Top
Protein Sequence Length: 514 aa Download sequence
MESTESQKIS SSSEPHQTHH HHHLHHLLQQ QNQRQRQHQH QQQQQSSSLQ LVSFDQDLSD 60 PGPSPGPSPS PFMGSFSIQV AGGGGGGNDG GGGGGGGRNS STSTSTTTST TTTTTTTTNP 120 PQLIDATLAI STKSGSSLLD PTKKQQQNQL TISTTPPPTT VAKRSSKDRH TKVDGRGRRI 180 RMPATCAARV FQLTRELGHK SDGETIEWLL QQAEPAIIAA TGTGTIPANF STLNVSLRSS 240 GSTISAPPSK SVSHSFHGAL ALAHHHYDEG SDPNRRLLGE TGISPSGMLG FHHQLLTADQ 300 IGDHQIGSGG GGGESADTYL RKRFREDLFK EESQQNPDTG NDSTSPSGNK SSRTDIQLQI 360 SQQQESSTNP SGGGGLIRPT SNLMPATAMW AVAPAPSSGG NTFWMLPVTA GSVAQTTAAA 420 MCGGAGPSEP PVWTFPTAGG QYRTTSINSP SGSTIQAPLH FMAPRFNISG GLEFQGGRMG 480 PVPLGSMLLQ QPPAGAAAAS QHLGLGISDT NLVF

Sequence ? help Back to Top

Protein Sequence Length: 514 aa Download sequence

MESTESQKIS SSSEPHQTHH HHHLHHLLQQ QNQRQRQHQH QQQQQSSSLQ LVSFDQDLSD  60
PGPSPGPSPS PFMGSFSIQV AGGGGGGNDG GGGGGGGRNS STSTSTTTST TTTTTTTTNP  120
PQLIDATLAI STKSGSSLLD PTKKQQQNQL TISTTPPPTT VAKRSSKDRH TKVDGRGRRI  180
RMPATCAARV FQLTRELGHK SDGETIEWLL QQAEPAIIAA TGTGTIPANF STLNVSLRSS  240
GSTISAPPSK SVSHSFHGAL ALAHHHYDEG SDPNRRLLGE TGISPSGMLG FHHQLLTADQ  300
IGDHQIGSGG GGGESADTYL RKRFREDLFK EESQQNPDTG NDSTSPSGNK SSRTDIQLQI  360
SQQQESSTNP SGGGGLIRPT SNLMPATAMW AVAPAPSSGG NTFWMLPVTA GSVAQTTAAA  420
MCGGAGPSEP PVWTFPTAGG QYRTTSINSP SGSTIQAPLH FMAPRFNISG GLEFQGGRMG  480
PVPLGSMLLQ QPPAGAAAAS QHLGLGISDT NLVF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58100.1	1e-66	TCP family protein