PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA11852.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family C2H2
Protein Properties Length: 345aa    MW: 39629.5 Da    PI: 9.0618
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA11852.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2120.0006597120123
                 EEETTTTEEESSHHHHHHHHHH.T CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                 y C  Cg+ F +++ L++H +  H
  OVA11852.1  97 YLCRVCGRKFHTNDKLVNHFKQlH 120
                 56*****************98766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
MSILEGKSPS LEPKTDEKKV AIFWDLDNKQ PKSFPPFDAA IRLKKAASSF GFVHYMIAYA  60
NHHAFSYVPP DVREQRKERK VLNKLENRGV IKPVVPYLCR VCGRKFHTND KLVNHFKQLH  120
EREQVKRLNR LESSRGKRRV QLVGKLSMKM EKYKNAARDV LTPKVGYGLA DELKRAGFWV  180
RLVSDKPQAA DVALRNQMVE MMDRKRADCI VLVSDDSDFV DVLREAKLRC LKTVVVGDNN  240
DGALKRCADV GFSWKEIMLG KAKKEAVSVV GRWKDRDVLK KLEWTYKSEL GEDESDIDDS  300
EFEIEDEDIK DTVSEAGGDL VKKEDIKPWW ELDSDIDDPP AKSFK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12240.11e-131C2H2 family protein