PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA11616.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

FAR1

Protein Properties

Length: 679aa MW: 78420.3 Da PI: 7.5829

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA11616.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	64.9	2.2e-20	62	155	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 +fY+e+Ak++GFs+r+++++ + + t+r fvC + g++ ++++++k +r+r+++r+gC+a l+++k+ +w+vt + ++HnHel OVA11616.1 62 EFYSEFAKRCGFSIRRHRTEGKdGVGKGLTRRYFVCHRAGNTPIKTSAESKPQRNRKSSRCGCQAYLRISKTMdlgVPEWRVTGFANHHNHELL 155 6************9998877356667999**********999999***************998677789***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 679 aa Download sequence
MSEEARQILE AYDDHSDQRS LSLDDTSSAE ESHDDTRLSL ETSTDAIPYI GQRFVTHDAA 60 YEFYSEFAKR CGFSIRRHRT EGKDGVGKGL TRRYFVCHRA GNTPIKTSAE SKPQRNRKSS 120 RCGCQAYLRI SKTMDLGVPE WRVTGFANHH NHELLEPNQV RFLPAYRTIS ETDKNRIFMF 180 AKTGISVQQM MRLMELEKCV EPGYLPFTEK DVRNLLQSFR KLDQEDDSID LLRMCKNIKD 240 KDPNFRYEYT IDANNRLENI AWSYASSVQS YDIFGDAVVF DTTHRLTAFD MPLGIWVGVN 300 NYGMPCFFGC VLLREENTRS YSWALKAFLG IMNGKAPETI LTDQNMCLKE AIAIEMPRTK 360 HALCIWLIVS KFPSWFNAVL GERYNDWKAE FYRLYNLETM EDFELGWRDM VNSFGLHTNR 420 HIANLFALRT LWALPYLRSH FFAGMTTTVQ SKSINAFIQR FLSAQTRLAH FVEQVAVAVD 480 FKDQAGEQQT MQQNLQNICL KTGAPMEAHA ATILTPYAFC KLQEELVLAA HYASFQLEDG 540 CFHVRHHTKM DGGRKVIWVP HEDIISCSCH QFEFSGILCR HSLRVLSTMN CFQIPERYLP 600 LRWRRINTTP TKSLHTTSND HVERVQALQS LVSTLITESA KTKERLDIAT EQVSLLLSRI 660 REQPISTQSL RDFTIHKTH

Sequence ? help Back to Top

Protein Sequence Length: 679 aa Download sequence

MSEEARQILE AYDDHSDQRS LSLDDTSSAE ESHDDTRLSL ETSTDAIPYI GQRFVTHDAA  60
YEFYSEFAKR CGFSIRRHRT EGKDGVGKGL TRRYFVCHRA GNTPIKTSAE SKPQRNRKSS  120
RCGCQAYLRI SKTMDLGVPE WRVTGFANHH NHELLEPNQV RFLPAYRTIS ETDKNRIFMF  180
AKTGISVQQM MRLMELEKCV EPGYLPFTEK DVRNLLQSFR KLDQEDDSID LLRMCKNIKD  240
KDPNFRYEYT IDANNRLENI AWSYASSVQS YDIFGDAVVF DTTHRLTAFD MPLGIWVGVN  300
NYGMPCFFGC VLLREENTRS YSWALKAFLG IMNGKAPETI LTDQNMCLKE AIAIEMPRTK  360
HALCIWLIVS KFPSWFNAVL GERYNDWKAE FYRLYNLETM EDFELGWRDM VNSFGLHTNR  420
HIANLFALRT LWALPYLRSH FFAGMTTTVQ SKSINAFIQR FLSAQTRLAH FVEQVAVAVD  480
FKDQAGEQQT MQQNLQNICL KTGAPMEAHA ATILTPYAFC KLQEELVLAA HYASFQLEDG  540
CFHVRHHTKM DGGRKVIWVP HEDIISCSCH QFEFSGILCR HSLRVLSTMN CFQIPERYLP  600
LRWRRINTTP TKSLHTTSND HVERVQALQS LVSTLITESA KTKERLDIAT EQVSLLLSRI  660
REQPISTQSL RDFTIHKTH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein