PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA10208.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

FAR1

Protein Properties

Length: 680aa MW: 78104.1 Da PI: 7.3171

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA10208.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	65.8	1.1e-20	62	154	1	89
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHel 89 +fY+e+Ak++GFs+r+++++ + + t+r fvC + g++ + ++++k +r+r+++r+gC+a l+++k+ +w+vt + ++HnHel OVA10208.1 62 EFYSEFAKRCGFSIRRHRTEGKdGVGKGLTRRYFVCHRAGNTPVKASNESKPQRNRKSSRCGCQAYLRISKNMdlgVPEWRVTGFTNHHNHEL 154 6************9998877356667999***********99999***************998777789***********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 680 aa Download sequence
MYKEGSLMME THDEYSDQRS LSLDDTSSAE ESPQDTGRSL ESSDDATPYI GQRFVTHDAA 60 YEFYSEFAKR CGFSIRRHRT EGKDGVGKGL TRRYFVCHRA GNTPVKASNE SKPQRNRKSS 120 RCGCQAYLRI SKNMDLGVPE WRVTGFTNHH NHELLLPNQV RFLPAYRTIS ETDKNRIFMF 180 AKTGISVQQM MRLMELEKCV EPGYLPFTEK DVRNLLQSFK KVDQEDDSVD LLRMCKNIKD 240 KDPNFRYEYT LDVNERLENI AWSYASSIQS YDIFGDAVVF DTTHRLTSFD MPLGIWVGMN 300 NYGTPCFFAC VLLREENTRS FSWALKAFLG FMNGKAPLTI LTDQNISLKE AIAIEMPRTK 360 HALCIWFIVA KFPSWFNAVL GERYNEWKAE FYRLYNLEMI EDFELGWGNM VNSFGLHTNR 420 HISSLFALRM HWALPYLRSH FLAGMTTTGP SKSINAFIQR FLSAQTRLAH FVEQAAVAID 480 FKDQAGEQQI MQQNLQNICL KTGAPMESHA ATILTPYAFC KLQEELVLAA HYASFMLEEG 540 YFLVRHHAEM EGGHKVIWIA QGCIITCSCR QFEFSGILCR HALRVLSAMN CFQIPEQYLP 600 IRWRRINTAP TKLLQITGSD HSEQVQALQS MVSTLITESA KSRERLDIAT EQISILLSRI 660 KEQPASTQGT TDLIIHEIHR

Sequence ? help Back to Top

Protein Sequence Length: 680 aa Download sequence

MYKEGSLMME THDEYSDQRS LSLDDTSSAE ESPQDTGRSL ESSDDATPYI GQRFVTHDAA  60
YEFYSEFAKR CGFSIRRHRT EGKDGVGKGL TRRYFVCHRA GNTPVKASNE SKPQRNRKSS  120
RCGCQAYLRI SKNMDLGVPE WRVTGFTNHH NHELLLPNQV RFLPAYRTIS ETDKNRIFMF  180
AKTGISVQQM MRLMELEKCV EPGYLPFTEK DVRNLLQSFK KVDQEDDSVD LLRMCKNIKD  240
KDPNFRYEYT LDVNERLENI AWSYASSIQS YDIFGDAVVF DTTHRLTSFD MPLGIWVGMN  300
NYGTPCFFAC VLLREENTRS FSWALKAFLG FMNGKAPLTI LTDQNISLKE AIAIEMPRTK  360
HALCIWFIVA KFPSWFNAVL GERYNEWKAE FYRLYNLEMI EDFELGWGNM VNSFGLHTNR  420
HISSLFALRM HWALPYLRSH FLAGMTTTGP SKSINAFIQR FLSAQTRLAH FVEQAAVAID  480
FKDQAGEQQI MQQNLQNICL KTGAPMESHA ATILTPYAFC KLQEELVLAA HYASFMLEEG  540
YFLVRHHAEM EGGHKVIWIA QGCIITCSCR QFEFSGILCR HALRVLSAMN CFQIPEQYLP  600
IRWRRINTAP TKLLQITGSD HSEQVQALQS MVSTLITESA KSRERLDIAT EQISILLSRI  660
KEQPASTQGT TDLIIHEIHR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein