PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA10125.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family GATA
Protein Properties Length: 343aa    MW: 37024.6 Da    PI: 4.9854
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA10125.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA542.2e-17252285134
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                 C +C  tkTp+WR gp g+ktLCnaCG+++++ +
  OVA10125.1 252 CLHCEITKTPQWRAGPMGPKTLCNACGVRFKSGR 285
                 99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    
MIGPGFIDEM DLDICGDFFD HIDDLLDFPS EDIEGGGGVV GGGDCNAFLD IWSMPPPESL  60
VGPCSDFSNK SSDLPTELPV PHEDIAQLEW LSTFVEDSFS AGSINLDPDF TNKDKKDDSH  120
LFQTSSPVSV LESSSSCSGG KTMPPSPDTV VPGRARSKRP RPAIFNPRSA LNLVSPTSSI  180
TDTQAPPISI SELSSELENF AESHPPNIPK PDGTEQKKKK KKKKLSPPLP SSSSEGDSVQ  240
QQQQPAVAVR KCLHCEITKT PQWRAGPMGP KTLCNACGVR FKSGRLFPEY RPAASPTFVA  300
SLHSNSHKKV LEMRIKAAPE TGNPMSPAPE FLPASNTHLL DYI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1158162KRPRP
2217223KKKKKKK
3218224KKKKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.11e-40GATA family protein