PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA09599.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

TCP

Protein Properties

Length: 272aa MW: 29060.2 Da PI: 7.2371

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA09599.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	126.8	2.2e-39	41	126	3	87
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsss 87 +k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i+++tgt++++as a+ s+s++++s s OVA09599.1 41 PKRSSNKDRHTKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASVLaAAGGSVSQQGTSAS 126 799*****************************************************************888544444444443332 PP

Sequence ? help Back to Top
Protein Sequence Length: 272 aa Download sequence
MEPKESSKLP QAQMEENRTT EVKDFSIVIA EKDEGKKQLV PKRSSNKDRH TKVDGRGRRI 60 RMPALCAARI FQLTRELGHK SDGETIQWLL QQAEPSIIAA TGTGTIPASV LAAAGGSVSQ 120 QGTSASAGLH PKINELGSDI GSSGRNNWNV IGANMGRSHG ATGLWPSVSE FGSGFVPPSG 180 PSTSNLGNES SNYVPRIGFH GFELPGSNLG PMSFSSIWGG SQQLPGLQLG LSQDGHIGVL 240 NPQALNQLYQ QQQQQQQQQE QPSKDDSQDS GH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	3e-68	TCP family protein