PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA07905.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

C2H2

Protein Properties

Length: 571aa MW: 64071.7 Da PI: 7.4993

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA07905.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.9	0.00071	484	506	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+C k+F++ L H r+H OVA07905.1 484 HECPICFKVFPSGQALGGHKRSH 506 79******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 571 aa Download sequence
MEEDQEHKHV CKFCDKSFPC GRSLGGHMRS HMKNTSAKAK EKINKKNTIC SSVDGGNNSN 60 STFMVDFEAG GGHGVYGLRE NPKKSWRLSD FSDGNLMQNQ VCKECGKGFQ SCKALFGHMR 120 CHVERERVSI NNSLQEDSWT GENQKLVMDS QSDNEAVAPK RRRRTRRTRY KSTTTTTTSS 180 SSFSLVNAST DNNSEIEQEQ EEVAICLMML SRDVGYWGGL DSVVDSSDNN SVVLEVRSSV 240 ITKNIEEIKD FNGEKSTVKM KKPREKKLES STWESGNAGL KRKISELGGF TFGLKKVESE 300 VSVDVFFGKD DFERHKTDSE AVFKVFDDEL GKVSNNEDRI KCTDTEVMKN LIKEADEQGD 360 SVFLEYNSSK KTKYNSEEGK NSPKKIKYDA LDSEIGKISS KKSKYECTTC NKVFHSYQAL 420 GGHKASHKKI KSCFSSKIES SETSIETEVS PDPTVESKLI KSCSNESPIK REREISCIAK 480 KSKHECPICF KVFPSGQALG GHKRSHLIEN AEVRGNQNTV IQQQIPEIHD LLDLNLPAPI 540 EEETKDQIGF NPWWVGSNHN SHEPPVGMIS H

Sequence ? help Back to Top

Protein Sequence Length: 571 aa Download sequence

MEEDQEHKHV CKFCDKSFPC GRSLGGHMRS HMKNTSAKAK EKINKKNTIC SSVDGGNNSN  60
STFMVDFEAG GGHGVYGLRE NPKKSWRLSD FSDGNLMQNQ VCKECGKGFQ SCKALFGHMR  120
CHVERERVSI NNSLQEDSWT GENQKLVMDS QSDNEAVAPK RRRRTRRTRY KSTTTTTTSS  180
SSFSLVNAST DNNSEIEQEQ EEVAICLMML SRDVGYWGGL DSVVDSSDNN SVVLEVRSSV  240
ITKNIEEIKD FNGEKSTVKM KKPREKKLES STWESGNAGL KRKISELGGF TFGLKKVESE  300
VSVDVFFGKD DFERHKTDSE AVFKVFDDEL GKVSNNEDRI KCTDTEVMKN LIKEADEQGD  360
SVFLEYNSSK KTKYNSEEGK NSPKKIKYDA LDSEIGKISS KKSKYECTTC NKVFHSYQAL  420
GGHKASHKKI KSCFSSKIES SETSIETEVS PDPTVESKLI KSCSNESPIK REREISCIAK  480
KSKHECPICF KVFPSGQALG GHKRSHLIEN AEVRGNQNTV IQQQIPEIHD LLDLNLPAPI  540
EEETKDQIGF NPWWVGSNHN SHEPPVGMIS H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26610.1	2e-39	C2H2 family protein