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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OVA07605.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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| Family | HD-ZIP | ||||||||
| Protein Properties | Length: 214aa MW: 24362.9 Da PI: 4.2981 | ||||||||
| Description | HD-ZIP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Homeobox | 56.6 | 4.3e-18 | 9 | 52 | 13 | 56 |
HHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 13 eeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
Le+ Fe ++++ e++++LAkklgL+ rqV vWFqNrRa++k
OVA07605.1 9 LLLEKSFEAENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWK 52
67*****************************************9 PP
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| 2 | HD-ZIP_I/II | 119.6 | 1.7e-38 | 8 | 89 | 11 | 92 |
HD-ZIP_I/II 11 vklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92
v lLE+sFe+e+kLeperK++la++LglqprqvavWFqnrRAR+ktkqlE+dy+ Lk++yd+l ++ +++ ke+e+L++e+
OVA07605.1 8 VLLLEKSFEAENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLLKSSYDSLLTDYDAIVKENEKLKSEVV 89
678***************************************************************************9986 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 214 aa Download sequence |
MEITFFKVLL LEKSFEAENK LEPERKTQLA KKLGLQPRQV AVWFQNRRAR WKTKQLERDY 60 DLLKSSYDSL LTDYDAIVKE NEKLKSEVVS LTEKLQAKEV AGMVVVGQKS DPQFSFDDTA 120 NDAVAAAAQF NIKTEDHLSS GTGGSAVVDE DGPQLVDSGD SYFPDDVYHH GYIGPVNAVP 180 SEEDDGSDDN RSYWAMEHQQ EEQETEPLNW WIWP |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 47 | 55 | RRARWKTKQ |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT3G01470.1 | 2e-54 | HD-ZIP family protein | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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