PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA07311.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

SBP

Protein Properties

Length: 447aa MW: 48894.8 Da PI: 8.1015

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA07311.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	130.6	5.6e-41	226	302	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 Cq+egC+adl++ak+yhrrhkvCe hska++vl++gl+qrfCqqCsrfh lsefD++krsCr+rLa+hn+rrrk+q+ OVA07311.1 226 CQAEGCSADLTHAKHYHRRHKVCELHSKAATVLTAGLTQRFCQQCSRFHLLSEFDQGKRSCRKRLADHNRRRRKPQN 302 **************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence
MLISSGGHGG DGDDDQETTT HPHHHQQQHS DHHQTRQIFD PYNNNHHHHH NHQTLSSAAA 60 GNLFHSTDPT PTPPNNATNH HPFFEQQEQN LQTHLQNTTF YPHHQVDPRA FTLSYPPPPS 120 HHHHHHQQQQ QQQRTTTNFS PESMAEASGL MMMMPKNEEV CGRVVGLDFP ARIGLNLGGR 180 TYFSSSEDDF VNRLYRGRYS SSRPLQLGGE ATGPTHPQTS NAPPGCQAEG CSADLTHAKH 240 YHRRHKVCEL HSKAATVLTA GLTQRFCQQC SRFHLLSEFD QGKRSCRKRL ADHNRRRRKP 300 QNQPQSQQQS QHQLESSTTT TTTTTTNSPS SPSENPAAAK GSSPESGAHS SSSVTVAAVS 360 SSSSPPRMSL GCCYQLQPHP AAGGGGGGGG GGHNYKASGG SSSSTTTASS SSSFFSAAAP 420 AVVGNFRRYE RQSSRWDEQD AEDNKSR

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence

MLISSGGHGG DGDDDQETTT HPHHHQQQHS DHHQTRQIFD PYNNNHHHHH NHQTLSSAAA  60
GNLFHSTDPT PTPPNNATNH HPFFEQQEQN LQTHLQNTTF YPHHQVDPRA FTLSYPPPPS  120
HHHHHHQQQQ QQQRTTTNFS PESMAEASGL MMMMPKNEEV CGRVVGLDFP ARIGLNLGGR  180
TYFSSSEDDF VNRLYRGRYS SSRPLQLGGE ATGPTHPQTS NAPPGCQAEG CSADLTHAKH  240
YHRRHKVCEL HSKAATVLTA GLTQRFCQQC SRFHLLSEFD QGKRSCRKRL ADHNRRRRKP  300
QNQPQSQQQS QHQLESSTTT TTTTTTNSPS SPSENPAAAK GSSPESGAHS SSSVTVAAVS  360
SSSSPPRMSL GCCYQLQPHP AAGGGGGGGG GGHNYKASGG SSSSTTTASS SSSFFSAAAP  420
AVVGNFRRYE RQSSRWDEQD AEDNKSR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	283	300	KRSCRKRLADHNRRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G02065.1	1e-57	SBP family protein