PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA07094.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

TCP

Protein Properties

Length: 470aa MW: 50729.5 Da PI: 6.5965

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA07094.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	60.2	7.9e-19	26	82	4	60
TCP 4 kkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaik 60 k++r ++h+k +gR+ R+R++a+ca +F+L++eLG+ +d++t+ WLl+q p+ OVA07094.1 26 KRRRVIDRHAKIDGRGCRIRIPASCAPGIFQLTQELGLRSDGETVHWLLEQTRPELV 82 788999*********************************************999765 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
MEIQPVIGNA CQSPEESNTN TNNNNKRRRV IDRHAKIDGR GCRIRIPASC APGIFQLTQE 60 LGLRSDGETV HWLLEQTRPE LVLQPNPKLP SKTPPRLRLP PSSTDFPSCP IPIAFAYPED 120 SVNGKITALV PVTNGSGTAA MSSGEANVAS DTSHRQTVRA TVVQASTVFY DTRATLDKAE 180 RLIAGAAAYG SQLVVFPEAF VGGYPRISNF SVTDGSYPIE EHEDFQKYRA AAIEVPGPEG 240 DRLAKISGKY KVHLVMGVVE REGSTLYSTI LFFDSQGQYL GKHRKLMLAA SEHTIWRSGE 300 KTTLPVYKTA IGKIGGVMCW DNRMPLLRTE LYAKGVEIYC APTADASDVW RASMTHIAIE 360 GGCFVLSANQ FCQRKDYPLQ PECVSGDANT QLSPESVVCS GGSVIISPSG AILAGPNYQG 420 ESLISADLDL GEIERAKLEF NGVGHTLGAE SLSPNVKDPN PVPLASAVKI

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

MEIQPVIGNA CQSPEESNTN TNNNNKRRRV IDRHAKIDGR GCRIRIPASC APGIFQLTQE  60
LGLRSDGETV HWLLEQTRPE LVLQPNPKLP SKTPPRLRLP PSSTDFPSCP IPIAFAYPED  120
SVNGKITALV PVTNGSGTAA MSSGEANVAS DTSHRQTVRA TVVQASTVFY DTRATLDKAE  180
RLIAGAAAYG SQLVVFPEAF VGGYPRISNF SVTDGSYPIE EHEDFQKYRA AAIEVPGPEG  240
DRLAKISGKY KVHLVMGVVE REGSTLYSTI LFFDSQGQYL GKHRKLMLAA SEHTIWRSGE  300
KTTLPVYKTA IGKIGGVMCW DNRMPLLRTE LYAKGVEIYC APTADASDVW RASMTHIAIE  360
GGCFVLSANQ FCQRKDYPLQ PECVSGDANT QLSPESVVCS GGSVIISPSG AILAGPNYQG  420
ESLISADLDL GEIERAKLEF NGVGHTLGAE SLSPNVKDPN PVPLASAVKI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	26	30	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	5e-18	TCP family protein