PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA06926.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

AP2

Protein Properties

Length: 337aa MW: 38197.1 Da PI: 7.8914

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA06926.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	36.4	1.3e-11	40	96	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n ++k+ + g ++ +e Aa a++ a++k++g OVA06926.1 40 SIYRGVTRHRWTGRYEAHLWDkNCWNEsQNKKGRQGAYDGEEAAAHAYDLAALKYWG 96 57*****************99998898888888999999************98 PP
2	AP2	51.4	2.8e-16	139	190	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g OVA06926.1 139 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAATAYDMAAIEYRG 190 89**99******99966...3.6***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence
MAKISQQNQK NTSNSNTNTP TKVKRKRKSV PRDSPPQRSS IYRGVTRHRW TGRYEAHLWD 60 KNCWNESQNK KGRQGAYDGE EAAAHAYDLA ALKYWGKETI LNFPLSTYEE ELKEMEGQSK 120 EEYIGSLRRR SSGFSRGVSK YRGVARHHHN GRWEARIGRV FGNKYLYLGT YATQEEAATA 180 YDMAAIEYRG LNAVTNFDLS RYIKWLRPNN PNPNSNPNPT LNPSQDDLGL NSPLNHQSSV 240 ENSIYQPRPT SGTTSSSALG LLLQSSKFKE MLERTTSETT ECPSTPPESD PPRCSFPDDI 300 QTYFECQDSG SYVEGDDIIF GDLNSFSSPM FPCELDV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79700.2	1e-90	AP2 family protein