PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA06756.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

TCP

Protein Properties

Length: 334aa MW: 37706.8 Da PI: 10.5801

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA06756.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	141.3	7.4e-44	46	204	2	135
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...................ssssaseceaesssss 81 agkkdrhski T++g+RdRR+Rls+e+a++fF Lqd+LG+dk+skt++WLl+++kpaikel++ + +s OVA06756.1 46 AGKKDRHSKIVTAQGPRDRRMRLSLEIAKKFFSLQDMLGVDKASKTVQWLLTNSKPAIKELMNKigfsqrnkhkkdgyncsmnG---SSM--------- 132 89************************************************************98876655444444332211...111......... PP TCP 82 asnsssg........................kaaksaakskksqksaasalnlakesrakarararertrekmriknk 135 + +s +++k + +s+ ++ la+esrakarararert ek+r+++ OVA06756.1 133 ------SeliseleetafneedphgifekgkTTGPSPKEKKIRGSSKDIFHPLARESRAKARARARERTIEKKRTNQG 204 ......1122222333444445677888765333333344444455555699999***************999865 PP

Sequence ? help Back to Top
Protein Sequence Length: 334 aa Download sequence
MAAVSLNGSK NDHVYNALNV SSSSDKINYR NTTSTKRSPK KSTRSAGKKD RHSKIVTAQG 60 PRDRRMRLSL EIAKKFFSLQ DMLGVDKASK TVQWLLTNSK PAIKELMNKI GFSQRNKHKK 120 DGYNCSMNGS SMSELISELE ETAFNEEDPH GIFEKGKTTG PSPKEKKIRG SSKDIFHPLA 180 RESRAKARAR ARERTIEKKR TNQGLEKLKQ CFQANNPQNL NQFKCLSAFK KGEESGPLGH 240 TMKSFMEVVN EVKKPSSKSP QHQVIIKDNM GNHDVIESFV IRRKSSPTSI FNYHNDIGLS 300 SNFQENRDII IDNAGTSSSY YAMINMHLPT DMQF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68800.1	7e-27	TCP family protein