PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA06544.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family GRAS
Protein Properties Length: 534aa    MW: 58798.7 Da    PI: 4.9427
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA06544.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS429.23.3e-1311595211373
        GRAS   1 lvelLlecAeavssgdlelaqalLarlsel..aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                 lv+ L++cAe v+ gd  la +l+++++++  + ++g  + ++a yf eAL +r++          p + t++++++e+ + ++ f+e++P+lkf+h+t
  OVA06544.1 159 LVHFLMTCAESVQRGDIPLAASLIEEMRTIltRVNTGCGIGKVAGYFIEALTRRVFT---------PQTLTTSESTQENEFLYHHFYEACPYLKFAHFT 248
                 6899*************************977888899******************9.........3333333445677789999************** PP

        GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                 aNqaIlea++g++ vH+iDf++++GlQWpaL+qaLa Rp+gpp lR+Tg+g+p+++ +++l+e+g rLa++A +++v+f f+ ++a+rl+d+++++L+v
  OVA06544.1 249 ANQAILEAFDGHDSVHVIDFNLMHGLQWPALIQALALRPGGPPFLRLTGIGPPSPDGRDSLREIGLRLAELAWSVNVRFAFRGVAASRLDDVKPWMLQV 347
                 *************************************************************************************************** PP

        GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
                 kp Ea+a+n+++qlhrll ++ + +s++d+vL  ++sl+Pk+v++veqeadhn+++F +rf+eal+yys++fdslea      + ++ + +++++rei+
  OVA06544.1 348 KPTEAVAINSIMQLHRLLGSDPTRNSPIDSVLGWIRSLNPKIVTIVEQEADHNQPEFIDRFTEALYYYSTMFDSLEAC---GLQPEKAIAEMYIQREIC 443
                 ***************************************************************************888...467788888999****** PP

        GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                 nv++ceg+ r+erhe l+kWr+rl+++GF+p++l+++a kqa++ll  ++ +gy+vee++g+l+lgW++rpL+++SaW
  OVA06544.1 444 NVLCCEGSGRVERHEPLAKWRARLGASGFGPLHLGSNAFKQASMLLTLFSAEGYSVEEKEGCLTLGWHSRPLIAASAW 521
                 ****************************************************************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 534 aa     Download sequence    
MGPYDSGISA GSSSSSSSSS CAGKSLEIDG LLAGAGYNVR SSDLRQVAQR LEQLETVMVN  60
APVEISQLAS DAVHYNPSNI ASWVDSMLTE LNQPLPIPSD LSDFSDLGYI DNLVPPQLHQ  120
TVVNDAWTVH NTPQQQQIPA PQQQMTVVAA MEEDSGIRLV HFLMTCAESV QRGDIPLAAS  180
LIEEMRTILT RVNTGCGIGK VAGYFIEALT RRVFTPQTLT TSESTQENEF LYHHFYEACP  240
YLKFAHFTAN QAILEAFDGH DSVHVIDFNL MHGLQWPALI QALALRPGGP PFLRLTGIGP  300
PSPDGRDSLR EIGLRLAELA WSVNVRFAFR GVAASRLDDV KPWMLQVKPT EAVAINSIMQ  360
LHRLLGSDPT RNSPIDSVLG WIRSLNPKIV TIVEQEADHN QPEFIDRFTE ALYYYSTMFD  420
SLEACGLQPE KAIAEMYIQR EICNVLCCEG SGRVERHEPL AKWRARLGAS GFGPLHLGSN  480
AFKQASMLLT LFSAEGYSVE EKEGCLTLGW HSRPLIAASA WHPISEISPP LMQQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.11e-168GRAS family protein