PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA05579.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family M-type_MADS
Protein Properties Length: 198aa    MW: 22390.1 Da    PI: 4.7234
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA05579.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF47.22.9e-153361245
                HHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
      SRF-TF 12 tfskRrngilKKAeELSvLCdaevaviifsstgk 45
                t + R++g++KKA+ELS+LC+ae a+++fs+ +k
  OVA05579.1  3 TVIERKTGLFKKASELSTLCGAETAIVVFSPANK 36
                7799***************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MATVIERKTG LFKKASELST LCGAETAIVV FSPANKPFSF GHPSVDSVSN QFLASNSPSE  60
VGESSTIEPS FADYYRSANI NEFNKQVTEA MNQLLEEEDQ GKKLTEMEKV EFKDRYLWNS  120
PLEDLQYHEL EQLKVSMEEL KTKVYKEGEE RQNGVPPPLS FMAVNPPAMV NPLLSQTNQN  180
NKHTILHGFN YGLDHSYY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.17e-32M-type_MADS family protein