PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA04797.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

FAR1

Protein Properties

Length: 384aa MW: 43301.5 Da PI: 6.2006

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA04797.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	26.1	2.8e-08	29	67	53	91
FAR1 53 rtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 ++ a + +a+++vk++ +gkw+++++ +eHnHel p OVA04797.1 29 ENYAARESTIEAMMQVKRNGNGKWVMIQFIEEHNHELHP 67 45555566679*************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
MEEASESKES VAIEDVELEP CAGLDEAEEN YAARESTIEA MMQVKRNGNG KWVMIQFIEE 60 HNHELHPQSM YRPPSVYVFR SQKLTIPKEN ITRTPRSSGT LVSKKMSTKT SGADENLDDA 120 AKDCKKKADV EAYHRTLGLK TGSPYESQMS SIYTVDIFNK FQDEVLKILL CNIAHVQQEE 180 GGNATYVVKE LVMKSNGKRG IKEYTVLWNG LGTTISCICR LFEFKGYLCR HAMVVLFAVG 240 MYEIPSHYIL RRWTRDAKNI DLFDENCTGA QVWGPEYIEK CFIDLRTDSI KLAEEGSLSK 300 ERYKAVKIFL KEALIRVASM DKVPASYYAC MSTILLNARV IGKADEEDQD RQLPVVVELG 360 TTEAAEICGA GKRLKDGVRQ VRSA

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

MEEASESKES VAIEDVELEP CAGLDEAEEN YAARESTIEA MMQVKRNGNG KWVMIQFIEE  60
HNHELHPQSM YRPPSVYVFR SQKLTIPKEN ITRTPRSSGT LVSKKMSTKT SGADENLDDA  120
AKDCKKKADV EAYHRTLGLK TGSPYESQMS SIYTVDIFNK FQDEVLKILL CNIAHVQQEE  180
GGNATYVVKE LVMKSNGKRG IKEYTVLWNG LGTTISCICR LFEFKGYLCR HAMVVLFAVG  240
MYEIPSHYIL RRWTRDAKNI DLFDENCTGA QVWGPEYIEK CFIDLRTDSI KLAEEGSLSK  300
ERYKAVKIFL KEALIRVASM DKVPASYYAC MSTILLNARV IGKADEEDQD RQLPVVVELG  360
TTEAAEICGA GKRLKDGVRQ VRSA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	4e-32	FAR1 family protein