PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA03871.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

FAR1

Protein Properties

Length: 668aa MW: 74510 Da PI: 6.6355

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA03871.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	64.7	2.6e-20	63	136	2	89
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 fY++YA++vGFs+r+ + ++sk +g++t+r+fvCs+eg ++++ ++ C+a+lk++++++gkw+ tk+++eHnH+ OVA03871.1 63 FYDSYARRVGFSTRVGQYSRSKPDGTVTCREFVCSREGLKRKNAES--------------CNAMLKIERKDSGKWVATKFVKEHNHST 136 9************************************9998877..............************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 668 aa Download sequence
MDVEVIDVET QNRGTEDAEP HDGGEEEMTG NSTDKEVLSQ DEDGAAEPHV DMEFDSEDAA 60 KTFYDSYARR VGFSTRVGQY SRSKPDGTVT CREFVCSREG LKRKNAESCN AMLKIERKDS 120 GKWVATKFVK EHNHSTVSPS KVHYLRPRRH FAGAAKTAAE TYAGVGLSPS GIMYVSVDGN 180 RVPVDPNRPV RNAPAVEARV ETISSFFDGY VNHQTTLPLF FRQYERVLEN GFEKEIEADF 240 DTICTTPVLK TPSPMEKQAA NLYTRKIFTK FQEELVETFV YTANKIEGDG AISTYRVAKF 300 EDDHKAYIVT MNVPEMRASC SCQMFEFSGI LCRHVLTVFT VTNVLTLPSH YILRRWTRNA 360 KSTIGSDERG SELQGQESVT MRYNNLCREA MKYAEEGAIA SETYNVAMAA LKDGGKKITV 420 AKKNVARAAP PSSGISGSNL EDSNKKTAMS VSDMTPSLWP RQEEVPRRFN QDEVARRFNQ 480 DEVARRFNQD EVARRFNLND AGAPTPPVAD LNLPRMAPIS LHRDDPPLDN MVVLPCLKSM 540 TWVMENKGSS PANRVAVINL KLHDYGKTPS GESEVKFQLS RITLEPMLKS MAYIGEQLST 600 PANRVAVINL KLQDTESISG ESEVKFQFTS GSFLRPLFGI NEKFSLVFGI KLGHGRAGVQ 660 QLGHLTTS

Sequence ? help Back to Top

Protein Sequence Length: 668 aa Download sequence

MDVEVIDVET QNRGTEDAEP HDGGEEEMTG NSTDKEVLSQ DEDGAAEPHV DMEFDSEDAA  60
KTFYDSYARR VGFSTRVGQY SRSKPDGTVT CREFVCSREG LKRKNAESCN AMLKIERKDS  120
GKWVATKFVK EHNHSTVSPS KVHYLRPRRH FAGAAKTAAE TYAGVGLSPS GIMYVSVDGN  180
RVPVDPNRPV RNAPAVEARV ETISSFFDGY VNHQTTLPLF FRQYERVLEN GFEKEIEADF  240
DTICTTPVLK TPSPMEKQAA NLYTRKIFTK FQEELVETFV YTANKIEGDG AISTYRVAKF  300
EDDHKAYIVT MNVPEMRASC SCQMFEFSGI LCRHVLTVFT VTNVLTLPSH YILRRWTRNA  360
KSTIGSDERG SELQGQESVT MRYNNLCREA MKYAEEGAIA SETYNVAMAA LKDGGKKITV  420
AKKNVARAAP PSSGISGSNL EDSNKKTAMS VSDMTPSLWP RQEEVPRRFN QDEVARRFNQ  480
DEVARRFNQD EVARRFNLND AGAPTPPVAD LNLPRMAPIS LHRDDPPLDN MVVLPCLKSM  540
TWVMENKGSS PANRVAVINL KLHDYGKTPS GESEVKFQLS RITLEPMLKS MAYIGEQLST  600
PANRVAVINL KLQDTESISG ESEVKFQFTS GSFLRPLFGI NEKFSLVFGI KLGHGRAGVQ  660
QLGHLTTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	0.0	FAR1 family protein