PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA03061.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | C2H2 | ||||||||
Protein Properties | Length: 180aa MW: 20383.1 Da PI: 4.5513 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.7 | 0.00019 | 36 | 58 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C C++ F++ L H++ H OVA03061.1 36 YECVFCKRGFTTAQALGGHMNIH 58 99*******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 180 aa Download sequence |
MESDRQDDSS KTSSEETNKP DDDQVKDDVG TGRSYYECVF CKRGFTTAQA LGGHMNIHRR 60 DRASRVRQPA PAPPVSSNQT IEYARPVFPT PVSTQYLPYQ MYFPPLTSTS TTEYVPSYHG 120 GDNLDIQNPR ASSRFDDDED WCTSLSLQIG PSHIDKEDEK RPDGKEDELD LELRLGHHDP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43540.1 | 4e-15 | C2H2 family protein |