PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA02876.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family HD-ZIP
Protein Properties Length: 802aa    MW: 88846.7 Da    PI: 6.0108
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA02876.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.31.8e-2089144156
                 TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 +++ +++t+ q++e+e+lF+++++p+ ++r +L+++lgL+ rqVk+WFqNrR+++k
  OVA02876.1  89 KKRYHRHTARQIQEMEALFKECPHPDDKQRMRLSQELGLKPRQVKFWFQNRRTQMK 144
                 688899***********************************************998 PP
2START158.84.3e-502875132206
                 HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS..............SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEE CS
       START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskv.............dsgealrasgvvdmvlallveellddkeqWdetla....kaetle 83 
                 la +a++elvk+ +a+ep+Wv+    + ++evl  +e s+              +++ea r+s+vv+m++ +lv  +ld + +W e ++    +a+t++
  OVA02876.1 287 LAMSAMDELVKMCQATEPLWVLCN--NGNKEVLNVEEHSRMfpwpanlkqheneFRTEATRDSAVVIMNSITLVDAFLDAN-KWMELFPsivaRAKTVQ 382
                 67899*******************..777788888877777999999**********************************.******99999****** PP

                 EECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE..TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--S CS
       START  84 vissg......galqlmvaelqalsplvp.RdfvfvRyirq.lgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkg 174
                  i+sg      g l+lm aelq++splvp R+  f+Ry++q  ++g+w+ivd  +ds  + p+  s+   +++pSg++i++++ng+s+v+wveh+++++
  OVA02876.1 383 IITSGvsghasGSLHLMHAELQFPSPLVPtREAHFLRYCQQnVEEGTWAIVDFPIDSIHDSPQVTSLLTYRRRPSGCIIQDMPNGYSRVIWVEHAEVED 481
                 *****************************************99***************9999977777778**************************** PP

                 SXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
       START 175 rlphwllrslvksglaegaktwvatlqrqcek 206
                 + +h +++++v+sg+a+ a++w++ lq+qce+
  OVA02876.1 482 KPVHHIFNQFVSSGMAFRAQRWLSVLQQQCER 513
                 ******************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 802 aa     Download sequence    
MYGDCQVLSS MGGNIVTTDA LFSSPIRNPN LNFMTNMPFH PFSAIIPKEE SGLQMILGKE  60
EEMESGSGSG HVDGGASADE QENEQKPKKK RYHRHTARQI QEMEALFKEC PHPDDKQRMR  120
LSQELGLKPR QVKFWFQNRR TQMKAQQDRS DNVILRAENE NLKNENYRLQ AAIRNVICPN  180
CGGPAILGEM SLDEQHLRLE NARLKEELER LSCITQRYSV RQIQAMGHAP HLLPSLDLDM  240
GIYSRHFQEP MGTDIIPMPN MSENQHDLQL AGCCLILDQE KPLAMELAMS AMDELVKMCQ  300
ATEPLWVLCN NGNKEVLNVE EHSRMFPWPA NLKQHENEFR TEATRDSAVV IMNSITLVDA  360
FLDANKWMEL FPSIVARAKT VQIITSGVSG HASGSLHLMH AELQFPSPLV PTREAHFLRY  420
CQQNVEEGTW AIVDFPIDSI HDSPQVTSLL TYRRRPSGCI IQDMPNGYSR VIWVEHAEVE  480
DKPVHHIFNQ FVSSGMAFRA QRWLSVLQQQ CERFASLMAR NISDLGVIPS PEARRNLMKL  540
SQRMIRTFCF NISASGGQSW TALSDSSVDT VRITTRKNIE PGQPNGVILC AVSTTWLPFS  600
HHQVFDFLRD ERQRSQLDVL SGGTSSHEVA HIANGSHPGN CISLLRINAA SNSAQNVELM  660
LQESCTDNAG SMVVYTTIDV DAVQLAMSGE DPSYIPILPL GFVMVPVNHI NNENGGNGLP  720
SDEVNGPTSG CLLTVGLQVL ASTIPAAKLN LSSVTAINNH ICNVVHQINA VLSGSSSSNN  780
NSPVGGNAGG GSCGEPTTAS EQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46880.10.0HD-ZIP family protein