PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OVA02584.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
|
||||||||
Family | C3H | ||||||||
Protein Properties | Length: 236aa MW: 26849.3 Da PI: 6.0439 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 40.2 | 5.6e-13 | 161 | 185 | 2 | 26 |
-S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHg 26 ktelC+ + +tG C+yG+rC+FaHg OVA02584.1 161 KTELCNKWEETGCCPYGERCQFAHG 185 8***********************8 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 236 aa Download sequence |
MEETQETSQA SKSYTSTPSS GYSYEADSLS VKLNRDFPRN WFELKRQGIL MNYEEMLVRY 60 NNCFVCLQQK FTEVNLLEEE NLKLRAENLD LSMLISAKEK DIISSITGLS SSKGDSSSGA 120 NNPNLLRLAA SKLPQIWNTQ CGEEKGKGVE LLEVYNQGMA KTELCNKWEE TGCCPYGERC 180 QFAHGIEELR PVIRHPRYKT EICRMISSGT ANCPYGHRCH FRHSLDPNED KAQVLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G68200.1 | 2e-42 | C3H family protein |