PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA02572.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

FAR1

Protein Properties

Length: 757aa MW: 86723.5 Da PI: 6.3539

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA02572.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63.7	5.2e-20	59	152	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 +fY+++Ak++GFs+r+++++ + + it+r+f+C + g+++ + +++ k +r+r ++r+gC a +++ ++ +w++t +++ HnHel OVA02572.1 59 EFYCSFAKQCGFSIRRHRTRGKdGVGRGITRRDFTCHRGGYPQIKPSDDGKLQRNRRSSRCGCPAYMRIVRRAdfdVPEWRITGFSNTHNHELL 152 6*************999887455667****************99**************99988676789***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 757 aa Download sequence
MSEGTSLVLE TSENETDLSP DDIGTIEEIP EDTILLHQTS VNLVPSIGQR FVSQDAAYEF 60 YCSFAKQCGF SIRRHRTRGK DGVGRGITRR DFTCHRGGYP QIKPSDDGKL QRNRRSSRCG 120 CPAYMRIVRR ADFDVPEWRI TGFSNTHNHE LLKSNEVHLL PAYCTLSSDD KSRICMFAKA 180 GMSVRQMLRL MELEKGVKLG CLPFTEIDVR NLLQSFRNVD RDNDAIDLLS MCKNIQDDDP 240 NFKYEFKIDA NNRLEHIAWS YASSIRLYED FGDAVVLDTT HRLDAYDMLL GIWIGVDNHG 300 MNCFFGCALL RDENMQSFSW ALKTFLGFVK GKAPQTILTD QNMWLKDAIA IEMPNTKHAF 360 CIWHIIAKFS DWFSALLGSQ YDNWKAEFHR LYNLDMVEDF EVGWREMINT YELHGNKHIA 420 SLHALRTFWA LPFLRCYFFA GMTSTFQPEM INTFIQRFLS AQSQLDNFVE QVAVVVDFRD 480 QAGAKQKVQR KLHKVSLKTG SPIESHAATV FTPYAFCKLQ EELLLAPQYA SFQMEEGCFH 540 VRHHTQVDGG CKVIWVPSQE LISCSCHQFE FSGILCRHVL RILSTNNCFH IPDQYLPNRW 600 RRASSFCRKP FQSATAPGHG DRFQLLQSMV STVMAESVET EDRLEFACDQ ISMVLSRIKA 660 FIPRPTHDGT DIPYDSPSDS LTLPEVEDSD GIVQRFTDGS AHDNFGKLKE RRVKDGFEFP 720 RKRRRCSLPC CGQFGHDAVD CPMVEGDDLN EDELGFL

Sequence ? help Back to Top

Protein Sequence Length: 757 aa Download sequence

MSEGTSLVLE TSENETDLSP DDIGTIEEIP EDTILLHQTS VNLVPSIGQR FVSQDAAYEF  60
YCSFAKQCGF SIRRHRTRGK DGVGRGITRR DFTCHRGGYP QIKPSDDGKL QRNRRSSRCG  120
CPAYMRIVRR ADFDVPEWRI TGFSNTHNHE LLKSNEVHLL PAYCTLSSDD KSRICMFAKA  180
GMSVRQMLRL MELEKGVKLG CLPFTEIDVR NLLQSFRNVD RDNDAIDLLS MCKNIQDDDP  240
NFKYEFKIDA NNRLEHIAWS YASSIRLYED FGDAVVLDTT HRLDAYDMLL GIWIGVDNHG  300
MNCFFGCALL RDENMQSFSW ALKTFLGFVK GKAPQTILTD QNMWLKDAIA IEMPNTKHAF  360
CIWHIIAKFS DWFSALLGSQ YDNWKAEFHR LYNLDMVEDF EVGWREMINT YELHGNKHIA  420
SLHALRTFWA LPFLRCYFFA GMTSTFQPEM INTFIQRFLS AQSQLDNFVE QVAVVVDFRD  480
QAGAKQKVQR KLHKVSLKTG SPIESHAATV FTPYAFCKLQ EELLLAPQYA SFQMEEGCFH  540
VRHHTQVDGG CKVIWVPSQE LISCSCHQFE FSGILCRHVL RILSTNNCFH IPDQYLPNRW  600
RRASSFCRKP FQSATAPGHG DRFQLLQSMV STVMAESVET EDRLEFACDQ ISMVLSRIKA  660
FIPRPTHDGT DIPYDSPSDS LTLPEVEDSD GIVQRFTDGS AHDNFGKLKE RRVKDGFEFP  720
RKRRRCSLPC CGQFGHDAVD CPMVEGDDLN EDELGFL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	721	725	RKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein