PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA02456.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family C2H2
Protein Properties Length: 169aa    MW: 19519.2 Da    PI: 6.6774
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA02456.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.20.000272648123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C  C++ F++   L  H++ H
  OVA02456.1 26 YECVFCKRGFTNAQALGGHMNIH 48
                99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    
MTSTYQETHQ DEDEDENEYT GTGRSYECVF CKRGFTNAQA LGGHMNIHRR DRARNSRNSM  60
VPPISNQQPK MNNDYYSMHG VSWPNSSHAS RNSPAMEYSM APPRNYNKYF SPSTSKTSTS  120
RHPPPPALSL FNEDHRYTNL GLRLGHGEER RQHEEQDDHE LDLELRLGT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43540.15e-15C2H2 family protein