PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA02136.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family FAR1
Protein Properties Length: 313aa    MW: 35534.4 Da    PI: 8.282
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA02136.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR171.22.5e-2248140190
        FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                 +fY+eY+++ G+++r+++++k +r  e+t++ fvCs+eg++++  k+  + k +r+ ++ r gCka++++++ k +  w++t ++ +HnH+l+
  OVA02136.1  48 DFYEEYGRQKGYNIRTRSTYKDRRGPEVTSALFVCSCEGFNQKIPKSddEGKIKRSGSTLRSGCKACMRITNVKgTTIWRITVFSDKHNHKLF 140
                 6*****************************************988875466777888899*************99****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MELTCVESDE NLIEIEKHGV IDDEVVDCDK MKEPCVGMTF DSFEEAKDFY EEYGRQKGYN  60
IRTRSTYKDR RGPEVTSALF VCSCEGFNQK IPKSDDEGKI KRSGSTLRSG CKACMRITNV  120
KGTTIWRITV FSDKHNHKLF IPRKKDLTKC NRRRPQITNN LTEGMRVSHI CRRLTQLAYM  180
AGRSEAIYKV IMADMDETFK KVSLMDRELI KYKNDEESPN EAISPGGDPA EAIGLQNQEV  240
ILDPCTLQAN GRKSTEKGKE KICNTQKPVQ FATFEGYCSD SLNFAQKKRK PDDSKPGKQT  300
SLSTPPFQAI MSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10240.16e-15FAR1 family protein