PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA02055.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 335aa MW: 36465 Da PI: 8.6069

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA02055.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.6	1.4e-18	16	61	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd+ l ++v+ +G+++W++I++ ++ gR++k+c++rw + OVA02055.1 16 KGPWSPEEDDALQRLVQTHGPRNWSLISKSIP-GRSGKSCRLRWCNQ 61 79****************************.*********985 PP
2	Myb_DNA-binding	55	1.9e-17	70	112	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++eEde +++a++++G++ W+tIar + gRt++ +k++w++ OVA02055.1 70 AFSPEEDETIIRAHAKFGNK-WATIARLLS-GRTDNAIKNHWNST 112 79****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 335 aa Download sequence
MMASSSSSRK DLDRIKGPWS PEEDDALQRL VQTHGPRNWS LISKSIPGRS GKSCRLRWCN 60 QLSPQVEHRA FSPEEDETII RAHAKFGNKW ATIARLLSGR TDNAIKNHWN STLKRKCSSM 120 SEDGSIDCND QQPLKRTASG GITGPTISGL YLNPSSPSGS DVSDSSVPVI SSSHVYRPVA 180 RTGGIVPPSQ IEASSSTNDP PTSLNLCLSL PGTDSSEVSN HVSGSNRATT PPPTMNASPT 240 QLLPPLPPLP PLQPLQQFAQ PHTHNLNRQF SDFGSPPEEK SFVPFSPEFL SVMQEMIKKE 300 VRNYMSGLEQ SGLCMQAADG IRNAVVKRMG ISKIE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	4e-93	MYB family protein