PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA01852.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB_related

Protein Properties

Length: 586aa MW: 61236.5 Da PI: 5.4128

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA01852.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.3	8.4e-09	203	247	1	44
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrw 44 r++WT eEd l+ av++ G ++W+ I + Rt+ q+ rw OVA01852.1 203 RKPWTLEEDMELIAAVQKCGERNWANILKGDFkGERTASQLSQRW 247 789************************974222478888777777 PP

Sequence ? help Back to Top
Protein Sequence Length: 586 aa Download sequence
MDESNNTKTK KGLISEDDVA LVLRRYNAPT VLAVLREVAQ FPDVKIDWNA LVKKTSTGIS 60 NAREYQMLWR HLAYCDMLGE KVEEAEPLDD DSDLEYELEA FPPVSDEASV EAAACVKVML 120 ASGLPDDSGP PNRATVEAPL TINIPNGQAT RDPSDNPQPS CSKGTNITVS VSVQKQPLPT 180 VTTAEGLDGS GSAAGGLPAR RKRKPWTLEE DMELIAAVQK CGERNWANIL KGDFKGERTA 240 SQLSQRWSII RKRQANSNPG GVSNPTGSQL SETQLATRNA LSLALNMPEY SSLSAVGATN 300 LVTPAVPAAS TEAAVVSGAP LEANTKSTAS NIVSHQNQQA PLQTATSLPK ATSNTTATKS 360 RVTTKKPTSF PVKSPVGPNP MIQAAAVAAG ARIATPSTAK SHLKAAQSKN AVHIRPGGNP 420 LIKPSVPGGT KPVAPRPNVH YIRTGLTSAS PPASTYSTVV PSILPPPAVT AQVPSVSAHT 480 SASCGTPAEG KSTNVITTGG VGSSSKEEEV KPAEEMNVDC AADVVQDSGQ GDQAALPDTE 540 MVTENPTAEN LGNSSKVVAD ENVPMDVDNN QIESETAKKM NSPAAN

Sequence ? help Back to Top

Protein Sequence Length: 586 aa Download sequence

MDESNNTKTK KGLISEDDVA LVLRRYNAPT VLAVLREVAQ FPDVKIDWNA LVKKTSTGIS  60
NAREYQMLWR HLAYCDMLGE KVEEAEPLDD DSDLEYELEA FPPVSDEASV EAAACVKVML  120
ASGLPDDSGP PNRATVEAPL TINIPNGQAT RDPSDNPQPS CSKGTNITVS VSVQKQPLPT  180
VTTAEGLDGS GSAAGGLPAR RKRKPWTLEE DMELIAAVQK CGERNWANIL KGDFKGERTA  240
SQLSQRWSII RKRQANSNPG GVSNPTGSQL SETQLATRNA LSLALNMPEY SSLSAVGATN  300
LVTPAVPAAS TEAAVVSGAP LEANTKSTAS NIVSHQNQQA PLQTATSLPK ATSNTTATKS  360
RVTTKKPTSF PVKSPVGPNP MIQAAAVAAG ARIATPSTAK SHLKAAQSKN AVHIRPGGNP  420
LIKPSVPGGT KPVAPRPNVH YIRTGLTSAS PPASTYSTVV PSILPPPAVT AQVPSVSAHT  480
SASCGTPAEG KSTNVITTGG VGSSSKEEEV KPAEEMNVDC AADVVQDSGQ GDQAALPDTE  540
MVTENPTAEN LGNSSKVVAD ENVPMDVDNN QIESETAKKM NSPAAN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	3e-73	MYB_related family protein