PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA01272.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | C2H2 | ||||||||
Protein Properties | Length: 249aa MW: 27383.2 Da PI: 5.6548 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.3 | 0.00012 | 76 | 98 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C + F++ L H+++H OVA01272.1 76 YTCTFCRREFRSAQALGGHMNVH 98 9********************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MATELGLLSL NQLQKLAHQA QQQQQPNSTT TPTGGSPWMW NSRRSTPHDD DDSWEVRAFA 60 EDTNNIMGTT WPPRSYTCTF CRREFRSAQA LGGHMNVHRR DRARLRQSPP ISADPSSSST 120 SSSTLIFPTQ EFLAANGGLC LFYPLSTSPA SSVFTSTSIN GCMELSPSTL LPMSNYATNN 180 LISSSSYPPV SFSGVTSTIE PSAAAASINS EKDDEKNNNN IQLQYFNNKN NMQFVEELDL 240 ELRLGSSKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17810.1 | 8e-33 | C2H2 family protein |