PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA01185.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

bHLH

Protein Properties

Length: 449aa MW: 49200.1 Da PI: 6.233

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA01185.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.6	6.2e-10	283	331	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq OVA01185.1 283 NSHSLAERVRREKISERMKLLQDLVPGC----DKITGKALMLDEIINYVQSLQ 331 58***********************9....899***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MDMDDNGDLG FQQRVGSNLM SPSSGMYTNL QTEKVVEETT MNPISMCKSS NGVDSFFHNG 60 WDPLVSLSQN VEFKGSSIDS HHHVGISSLV NALENQGISN SSHLVQYPSD LNLVELEPKL 120 PCLGSGSFTE MLSPFCLPES HQIANAGSVP DYPSNNENTG KTTTSSRKVI GHGTIFQDKL 180 LVTNEGAQRP IVGGKKRKRI PELPAGDTHS QFDSVQSMET EQQNDTSREA IEGPKGQDER 240 KQRNKQNPAS NLCGKQPKDS FQSGQAPKED YVHVRARRGQ ATNSHSLAER VRREKISERM 300 KLLQDLVPGC DKITGKALML DEIINYVQSL QRQVEFLSMK LATVNPELNI DIEQILSKDI 360 LHSQAGGSAI LGFGPGMNSS HSQPHLFPRG TMPAIQTTNP HSLSMHQAQM SNVWDDELQS 420 VIQTGLVSNP ALNSLGPNGK CPMLILDYS

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MDMDDNGDLG FQQRVGSNLM SPSSGMYTNL QTEKVVEETT MNPISMCKSS NGVDSFFHNG  60
WDPLVSLSQN VEFKGSSIDS HHHVGISSLV NALENQGISN SSHLVQYPSD LNLVELEPKL  120
PCLGSGSFTE MLSPFCLPES HQIANAGSVP DYPSNNENTG KTTTSSRKVI GHGTIFQDKL  180
LVTNEGAQRP IVGGKKRKRI PELPAGDTHS QFDSVQSMET EQQNDTSREA IEGPKGQDER  240
KQRNKQNPAS NLCGKQPKDS FQSGQAPKED YVHVRARRGQ ATNSHSLAER VRREKISERM  300
KLLQDLVPGC DKITGKALML DEIINYVQSL QRQVEFLSMK LATVNPELNI DIEQILSKDI  360
LHSQAGGSAI LGFGPGMNSS HSQPHLFPRG TMPAIQTTNP HSLSMHQAQM SNVWDDELQS  420
VIQTGLVSNP ALNSLGPNGK CPMLILDYS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10120.1	4e-66	bHLH family protein