PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA01002.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | MYB | ||||||||
Protein Properties | Length: 288aa MW: 33220.8 Da PI: 9.6257 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.3 | 1.6e-17 | 31 | 77 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W + Ed+llv +v+q+G + W+ Ia +++ gR +kqc++rw+++l OVA01002.1 31 KGSWRPYEDQLLVSLVQQHGEKKWSYIATMLN-GRIGKQCRERWYNHL 77 799*****************************.*************97 PP | |||||||
2 | Myb_DNA-binding | 52.6 | 1e-16 | 83 | 125 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +WT++E+ lv+a+ G++ W+ Ia++++ gRt++++k++w+ OVA01002.1 83 KEAWTQDEEVALVKAHSTIGNR-WAEIAKRIP-GRTENSIKNHWN 125 579*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 288 aa Download sequence |
MEMFRKDFSS LLKDPYFPVD ETPESERVVT KGSWRPYEDQ LLVSLVQQHG EKKWSYIATM 60 LNGRIGKQCR ERWYNHLRPD IKKEAWTQDE EVALVKAHST IGNRWAEIAK RIPGRTENSI 120 KNHWNATWRR LHSKSKCRKP SYSRGNGKPT SILQEYIRSL GLVVEKGIEK PKRKVKKAYT 180 PNTSLKDKAE QGQVSKEIYI PNAPIPPSPV NMDMTNGEMR INITDEQNQV MFDDMDISSF 240 FSSPPSSSYA FGTSLEDPMV GFPDGLYKMK NELDLVEMVA KSVNINNW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G27785.1 | 5e-55 | MYB family protein |