PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA00765.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

C2H2

Protein Properties

Length: 550aa MW: 61849 Da PI: 8.5097

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA00765.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.5	0.00043	85	104	2	21
EETTTTEEESSHHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHir 21 +C+ Cgk F ++ L H+r OVA00765.1 85 VCKECGKGFQSWKALFGHMR 104 6******************8 PP
2	zf-C2H2	12.5	0.00045	463	485	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+C k+Fs+ L H r+H OVA00765.1 463 HECPICFKVFSSGQALGGHKRSH 485 79******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 550 aa Download sequence
MEEDQEFKHI CKFCKKGFSC GRSLGGHMRS HMNNTSAETD ERESNNTFMV GFEAGGHTGY 60 GLRENPKKTW RISDSREREN FSDKVCKECG KGFQSWKALF GHMRCHSERD KVFQSLEEED 120 SWMGENQKLV MDSQSDNEAA APKRRRSRRT RYKNTNTNTT SCLSVANASS SVSEIEQEQE 180 EIAVCLMMLS RDVSYRGGLN CLVESSDNNS LLLEARSSSK VKEGRNLFCN DNVKEKISRG 240 KKKLGSRVSE SKNARFEGKR SELGGSGSGF SRNGIKKVES EVSVHGCFGD DEFKKPKFDD 300 ELEKNSYSRN RGKFSKSELV KDLIEEVEDQ TDLKYVKYNS SKRTKFNSYN PELDRDSSKK 360 VKYEGSDSEI CKYSPKKSKY KCMTCNKNFH SYQALGGHRA SHKKIKGCFA SRIESSETSI 420 ETDLSPDPTA DSKLIKSCNN ENSIELEVTG SAETSYGLKK NKHECPICFK VFSSGQALGG 480 HKRSHLVGGS EARNSQTIVI QQKLPVIRDL LDLNLPAPGE DETINGDVGL KPWWVGNNHK 540 HEPLVGLISN

Sequence ? help Back to Top

Protein Sequence Length: 550 aa Download sequence

MEEDQEFKHI CKFCKKGFSC GRSLGGHMRS HMNNTSAETD ERESNNTFMV GFEAGGHTGY  60
GLRENPKKTW RISDSREREN FSDKVCKECG KGFQSWKALF GHMRCHSERD KVFQSLEEED  120
SWMGENQKLV MDSQSDNEAA APKRRRSRRT RYKNTNTNTT SCLSVANASS SVSEIEQEQE  180
EIAVCLMMLS RDVSYRGGLN CLVESSDNNS LLLEARSSSK VKEGRNLFCN DNVKEKISRG  240
KKKLGSRVSE SKNARFEGKR SELGGSGSGF SRNGIKKVES EVSVHGCFGD DEFKKPKFDD  300
ELEKNSYSRN RGKFSKSELV KDLIEEVEDQ TDLKYVKYNS SKRTKFNSYN PELDRDSSKK  360
VKYEGSDSEI CKYSPKKSKY KCMTCNKNFH SYQALGGHRA SHKKIKGCFA SRIESSETSI  420
ETDLSPDPTA DSKLIKSCNN ENSIELEVTG SAETSYGLKK NKHECPICFK VFSSGQALGG  480
HKRSHLVGGS EARNSQTIVI QQKLPVIRDL LDLNLPAPGE DETINGDVGL KPWWVGNNHK  540
HEPLVGLISN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26610.1	2e-46	C2H2 family protein