PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA00409.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family C2H2
Protein Properties Length: 263aa    MW: 28487 Da    PI: 8.0998
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA00409.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2130.000393115123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ykC+ C+k F++   L  H  +H
  OVA00409.1  93 YKCSVCNKAFPSYQALGGHKASH 115
                 9***********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MALEALNSPS TATPSFHYDD MDLHYLEPWA KRKRSKRHRL ENPTPTEEEY LALCLIMLAR  60
GGTDSTISHK ITHSPPSLLQ VQPPPPPTLK LNYKCSVCNK AFPSYQALGG HKASHRKLAG  120
PPDDQLSTST TTTTTSTTNT NTTTTINPSG RTHECSICHK TFPSGQALGG HKRCHYDGGS  180
SATTTTTTTT VTSTNSDGVG STLTHRTGFD LNLPALPEFW PGFGVEISGR KCQISGDEEV  240
ESPHPMKKPR LLMPAEMGSS LIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.19e-48C2H2 family protein