PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA00317.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

HD-ZIP

Protein Properties

Length: 322aa MW: 36957.6 Da PI: 4.5108

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA00317.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.7	2.3e-19	85	138	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t++q+e Le+ Fe ++++ e++ +LAk lgL+ rqV +WFqNrRa++k OVA00317.1 85 KKRRLTTDQVEFLERNFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 138 56789************************************************9 PP
2	HD-ZIP_I/II	127.3	6.7e-41	84	174	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekkrrl+++qv++LE++Fe e+kLeperK +la++Lglqprqva+WFqnrRAR+ktkqlEkdy+aLk++y++lk + e+L ke+e+L++e+ OVA00317.1 84 EKKRRLTTDQVEFLERNFEVENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDALKASYNSLKINYENLLKEKEKLKTEV 174 69**************************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence
MAGGRVYGGS NISLLLQNEG ISRSSESLDN FLISSSSSTF AGSRSMVNFS DVHGVNLPEK 60 SFFRSFDHEE NGDDDFDEYF RQPEKKRRLT TDQVEFLERN FEVENKLEPE RKIQLAKDLG 120 LQPRQVAIWF QNRRARWKTK QLEKDYDALK ASYNSLKINY ENLLKEKEKL KTEVLTLTNQ 180 QLLKEKEKKN SESTEPNEQF HTQSQRLISN AVSEEKPSDA SVVVCKQEDL SSANSDVVDI 240 DSPHYTDGVH STLLMEPANS SHVFEADQSD LSQDEEDNFS RSLVPPVYNF PKLEDDVPSN 300 PPANSCNYEF LAEDQPVWFW SY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	133	141	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	2e-36	HD-ZIP family protein