PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022158576.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family ERF
Protein Properties Length: 312aa    MW: 32994.9 Da    PI: 9.3864
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022158576.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.69.8e-21145194255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrdp     + +r++lg+f+tae Aa+a++aa+++++g
  XP_022158576.1 145 RYRGVRQRP-WGKWAAEIRDPQ----KaARVWLGTFDTAEAAARAYDAAALRFRG 194
                     7********.**********93....36************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MCYLKVANQG GGAGGYQPYT ADQTGGEVPE AMFSVGYSQS GELLAMVSAL THVISGDRGG  60
APPPPVTSGV KKREREEETG SGIGRGYRGG IVDFRAIQLQ PHPPPSPPIL IKEEASSSSN  120
IIASAAAVTA VAATEAISGE ERRRRYRGVR QRPWGKWAAE IRDPQKAARV WLGTFDTAEA  180
AARAYDAAAL RFRGSKAKLN FPEFVTALPP SPAPPPPQPP SFPSQDSLGN YLQYSQLVQN  240
SGEILYNSPL ASFQSTFVPQ SNSLIGPSGV PNFPPPQLRY LRPPGNQNQG GGAGGDFSLP  300
SRTEFGYPPA SG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1141146ERRRRY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.17e-22ERF family protein