PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022158524.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

G2-like

Protein Properties

Length: 448aa MW: 49654.7 Da PI: 4.9688

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022158524.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	105	4.4e-33	232	286	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +pr+rWtpeLHe+Fve v++LGGse+AtPk +l+lm+v+gLt++hvkSHLQkYR+ XP_022158524.1 232 RPRMRWTPELHEAFVESVNKLGGSENATPKGVLKLMNVEGLTIYHVKSHLQKYRT 286 59****************************************************8 PP
2	Myb_DNA-binding	52.2	1.4e-16	234	285	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+ v++lGg t+k + + m+ +g+t +++ks++qky+ XP_022158524.1 234 RMRWTPELHEAFVESVNKLGGSenaTPKGVLKLMNvEGLTIYHVKSHLQKYR 285 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MSSSSRVLPK PLEEKYPKLP VSFQGSSQSE AMRHPIPRQV PPLVSSSGTV GHLFSSSSGF 60 RSDFPLMQPL SQDTNAQFFP FISQSANDES LLPPHGSSQS EVQSTAVTNN NLNENSASWS 120 TDTLQDLLDF PDNVPDQNSQ AQSMAGVLMS DDQAKRNDWP DWADQFISVD DALEPNWSEI 180 FSDANAGDPK PEVLRTSSAY FQVPQNQTNQ VDSVPTAEFH SVSNSLSTSS NRPRMRWTPE 240 LHEAFVESVN KLGGSENATP KGVLKLMNVE GLTIYHVKSH LQKYRTARYK PESSEGSSGK 300 KLNPIEEMKT LDLKTSMGIT EALRLQMEVQ KRLHEQLEIQ RNLQLRIEEQ GKYLQEMFEQ 360 QRKMENKLKT SSSILENMPR ADDQPENSEQ GRVTAGTSME NAEGTQEDGS PATSRKQKAH 420 ESEATKSSES NSSSPNAKRA KSSDASAL

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MSSSSRVLPK PLEEKYPKLP VSFQGSSQSE AMRHPIPRQV PPLVSSSGTV GHLFSSSSGF  60
RSDFPLMQPL SQDTNAQFFP FISQSANDES LLPPHGSSQS EVQSTAVTNN NLNENSASWS  120
TDTLQDLLDF PDNVPDQNSQ AQSMAGVLMS DDQAKRNDWP DWADQFISVD DALEPNWSEI  180
FSDANAGDPK PEVLRTSSAY FQVPQNQTNQ VDSVPTAEFH SVSNSLSTSS NRPRMRWTPE  240
LHEAFVESVN KLGGSENATP KGVLKLMNVE GLTIYHVKSH LQKYRTARYK PESSEGSSGK  300
KLNPIEEMKT LDLKTSMGIT EALRLQMEVQ KRLHEQLEIQ RNLQLRIEEQ GKYLQEMFEQ  360
QRKMENKLKT SSSILENMPR ADDQPENSEQ GRVTAGTSME NAEGTQEDGS PATSRKQKAH  420
ESEATKSSES NSSSPNAKRA KSSDASAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04450.2	8e-94	G2-like family protein