PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022158473.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | MYB | ||||||||
Protein Properties | Length: 501aa MW: 55581.6 Da PI: 7.6441 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.8 | 4.6e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l+++++ +G g+W+ ++++ g+ R++k+c++rw +yl XP_022158473.1 14 RGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYL 61 788*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.4 | 1.3e-16 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr+T+eE++l++ ++ G++ W+ Ia++++ gRt++++k++w+++ XP_022158473.1 67 RGRFTPEEEKLIISLHGVVGNR-WAHIASHLP-GRTDNEIKNYWNSW 111 89********************.*********.************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 501 aa Download sequence |
MGHHSCCNQQ KVKRGLWSPE EDEKLIRYIT THGYGCWSEV PEKAGLQRCG KSCRLRWINY 60 LRPDIRRGRF TPEEEKLIIS LHGVVGNRWA HIASHLPGRT DNEIKNYWNS WIKKKIRKPN 120 SVSSTVTAAX TTAANNTEHS QLSSSNPHQL NFLTQDLTTK HLSLHRETLF PIPAVSCPGL 180 FMFDTSSQEM FHDSLNLNSD ATWHMNHHHQ FPTAVLGGPQ MGLTAVAAAA ATSNYLPPLI 240 DNIESLVAMD DEGEMALQCL QRQELNEWVV ESTQPQNSNF LFWENVEGSL GGEEIIAPPS 300 NSAIGGGGEG VBSLSSSNFP SSLIISEKNR REISKYLFQE GVCYAKKDYN LAKHPEIDVP 360 NLQVIKLMQS FKSKEYVRET FAWMHYYWYL TNDGIEFLRT YLNLPSEIVP ATLKKQAKPA 420 GRPFGGPSGD RPRGPSRFDG ERRFGDRDGY RGGPRGPGGD FGDKGGAPAD YRPSFGGPGG 480 RPGFGRGAGG YGGAPAPSNL E |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G63910.1 | 2e-93 | MYB family protein |