PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022157918.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | MYB | ||||||||
Protein Properties | Length: 309aa MW: 34151.2 Da PI: 6.5997 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.2 | 2.8e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd lv +++++G+g+W++++ g+ R+ k+c++rw +yl XP_022157918.1 14 KGPWTPEEDIVLVSYIQEHGPGNWRAVPPNTGLLRCSKSCRLRWTNYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 49.6 | 9e-16 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T E++ ++++ ++lG++ W++Ia++++ Rt++++k++w+++l XP_022157918.1 67 RGNFTHHEEKMIIHLQALLGNR-WAAIASYLP-QRTDNDIKNHWNTHL 112 89********************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 309 aa Download sequence |
MGRPPCCDKQ GVKKGPWTPE EDIVLVSYIQ EHGPGNWRAV PPNTGLLRCS KSCRLRWTNY 60 LRPGIKRGNF THHEEKMIIH LQALLGNRWA AIASYLPQRT DNDIKNHWNT HLKKKLNSSL 120 HRSPAAALSA AASAAADGGL FTSRGQWERR LQTDIHMAKQ ALSDALSPES SKPPPPPLPP 180 AEPKSPHEAP AYASSADNIA RWLKEWNKTT PPNSGLASSP ANTNSGNCGG GRANEVDLSE 240 SFLGFDSFES SNSDQSPATS VFQGESEMMD ESSVELLPME VLEKWLNEDG KDYCFSEIYV 300 DEKLKYDLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G28910.1 | 1e-93 | MYB family protein |