PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022157817.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

FAR1

Protein Properties

Length: 680aa MW: 78015.8 Da PI: 7.7279

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022157817.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	66.1	9.3e-21	63	156	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 +fY+e+Ak++GFs+r+++++ + + t+r fvC + g++ ++ +++k +r+r+++r+gC+a ++++k+ +w+vt + ++HnHel XP_022157817.1 63 EFYSEFAKRCGFSIRRHRTEGKdGIGKGLTRRYFVCHRAGNTPIKTPNENKPQRNRKSSRCGCQAYMRISKTMelgPPEWRVTGFANHHNHELL 156 6************999887735667799*********9999999****************998677789***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 680 aa Download sequence
MMSEETGQLL VVYDDPSDQQ SLSLDETGST EESPDETRLS LDSSNDVIPY IGQRFPTHDS 60 AHEFYSEFAK RCGFSIRRHR TEGKDGIGKG LTRRYFVCHR AGNTPIKTPN ENKPQRNRKS 120 SRCGCQAYMR ISKTMELGPP EWRVTGFANH HNHELLEPNQ VRFLPAYRTI SDTDKTRIVM 180 YAKSGISVQQ MMRLMELEKG VEPGYLPFTE KDVRNLLQSF RKLDHEEESI DLLRMCRNIK 240 EKDPNFKFEY VIDSNNRLEN IAWSYASSIQ AYEIFGDAVV FDTTHRLTAF DMPLGIWVGI 300 NNYGMPCFLS CVLLREENLR SFSWALKTFI GFMNGKAPQT ILTDQNGCLK DAIAMELPTT 360 KHALCIWMIV AKFPSWFNAV LGERYNEWKS EFCRLYNLES IEDFEIGWRD MVNSFGLHTN 420 RHIVNLYSLR SFWASPFLRS HFFAGMTTIG QSKTINAFIQ RFLSAQTRLA QFIEQVAVAV 480 DFKDQAGEQQ TMQQNLQNIS LKTGAPMESH AATILTPFAF SKLQEQLVLA AHYASFQMDD 540 GFLVRHHTKA EGGRKVYWIP REGIISCSCH QFEFSGILCR HALRVLSTGN CFQIPDSYLP 600 VRWRRISMPS VKLLQSTTND HTERIQLLQS MVSTLVSESA KSRERLDIAT EQVSLLLSRV 660 REHPTSLSGS RDVSTIHRNL

Sequence ? help Back to Top

Protein Sequence Length: 680 aa Download sequence

MMSEETGQLL VVYDDPSDQQ SLSLDETGST EESPDETRLS LDSSNDVIPY IGQRFPTHDS  60
AHEFYSEFAK RCGFSIRRHR TEGKDGIGKG LTRRYFVCHR AGNTPIKTPN ENKPQRNRKS  120
SRCGCQAYMR ISKTMELGPP EWRVTGFANH HNHELLEPNQ VRFLPAYRTI SDTDKTRIVM  180
YAKSGISVQQ MMRLMELEKG VEPGYLPFTE KDVRNLLQSF RKLDHEEESI DLLRMCRNIK  240
EKDPNFKFEY VIDSNNRLEN IAWSYASSIQ AYEIFGDAVV FDTTHRLTAF DMPLGIWVGI  300
NNYGMPCFLS CVLLREENLR SFSWALKTFI GFMNGKAPQT ILTDQNGCLK DAIAMELPTT  360
KHALCIWMIV AKFPSWFNAV LGERYNEWKS EFCRLYNLES IEDFEIGWRD MVNSFGLHTN  420
RHIVNLYSLR SFWASPFLRS HFFAGMTTIG QSKTINAFIQ RFLSAQTRLA QFIEQVAVAV  480
DFKDQAGEQQ TMQQNLQNIS LKTGAPMESH AATILTPFAF SKLQEQLVLA AHYASFQMDD  540
GFLVRHHTKA EGGRKVYWIP REGIISCSCH QFEFSGILCR HALRVLSTGN CFQIPDSYLP  600
VRWRRISMPS VKLLQSTTND HTERIQLLQS MVSTLVSESA KSRERLDIAT EQVSLLLSRV  660
REHPTSLSGS RDVSTIHRNL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein