PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022157606.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

TCP

Protein Properties

Length: 297aa MW: 33922.8 Da PI: 9.4185

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022157606.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	142.3	3.8e-44	112	262	3	136
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.............ssssasec...eaesssss 81 gkkdrhski+T++g+RdRR+Rls+++a++fFdLqd+LGfdk+s+ti+WLl ++ aik+l ++ + s+ +c ea+ XP_022157606.1 112 GKKDRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASNTIDWLLSHSNSAIKKLKDSlnlnnnnhsaysyG--SQVSCgssEAV----- 199 89***********************************************************99987555555331..22223322111..... PP TCP 82 asnsssg..............kaaksaakskksqksaasalnlakesrakarararertrekmriknkl 136 + +a ++++++++ k+ + + +a+esr +arararert+ek +k+ + XP_022157606.1 200 ------SelttrdnnvasgkeSAFMATPTPSSKLKKGRQLRTVARESRDRARARARERTKEKLILKSAS 262 ......122222223445663444445588888888888999******************9888765 PP

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence
MKPCSTTEIN PLPFTHNQNI AWDYANPSSM GEDQDSYLQY CFFPDPFLDD DHDLFLSHFF 60 QQQQQHHLLI PAGNANWDQQ EREREQEKLT PDDNWKKQNS GKTKKLCSRK IGKKDRHSKI 120 CTAQGPRDRR MRLSLQIARK FFDLQDMLGF DKASNTIDWL LSHSNSAIKK LKDSLNLNNN 180 NHSAYSYGSQ VSCGSSEAVS ELTTRDNNVA SGKESAFMAT PTPSSKLKKG RQLRTVARES 240 RDRARARARE RTKEKLILKS ASTSTISDHP QHFPSILQTL CSGNSDHHHH PTPNFLP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	241	251	RDRARARARER
2	241	253	RDRARARARERTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68800.1	2e-31	TCP family protein