PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022157460.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | SBP | ||||||||
Protein Properties | Length: 141aa MW: 15947.7 Da PI: 10.3841 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 133.7 | 6e-42 | 9 | 86 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cq+egC+adls+ak+yhrrhkvCe+hska++v+++gl+qrfCqqCsrfh l+efD++krsCr+rLa+hn+rrrk+++ XP_022157460.1 9 RCQAEGCNADLSQAKHYHRRHKVCEFHSKASTVVTAGLTQRFCQQCSRFHVLTEFDNGKRSCRKRLADHNRRRRKTTQ 86 6**************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 141 aa Download sequence |
EPGSGIWVRC QAEGCNADLS QAKHYHRRHK VCEFHSKAST VVTAGLTQRF CQQCSRFHVL 60 TEFDNGKRSC RKRLADHNRR RRKTTQQSNQ GSPNSQPFET TSPTDAAARS TVDSTSQSSW 120 SVTMAMSPPQ MSLDRLNQRS Y |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G02065.1 | 8e-48 | SBP family protein |