PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022157352.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

FAR1

Protein Properties

Length: 879aa MW: 99292.6 Da PI: 6.28

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022157352.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	50.6	6.3e-16	60	132	2	88
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 fY+eYA++ GFs + + ++ k +g+i+ r+fvC +e +++++ ++ C+a+l+++ ++++kw+vtk+++eH+H+ XP_022157352.1 60 FYDEYARRYGFSSKLGQLSRAKSDGTIIARDFVCGRECSKRKSADS--------------CDAMLRIEFKDQDKWVVTKFVKEHSHS 132 9**********************************999998777..............************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 879 aa Download sequence
MDEVVEVDGM THPAVVDDSD VDPHEGEINT GEDSTLHDED GIIEPYVGME FESEGDAKTF 60 YDEYARRYGF SSKLGQLSRA KSDGTIIARD FVCGRECSKR KSADSCDAML RIEFKDQDKW 120 VVTKFVKEHS HSTGNSNKVH YLRPRRHFAG AAKTMTETAY AGSAGVPSGV MSVLMDDNRI 180 PAEKNCGVRS ASQAEANRSI NNASTINYGI RNAGRKRTLG RDAQNMLEYF KKMQSENPGF 240 FYAIQLDEDN RMANVFWADA RSRAAYSNFG DAVTLDTMYR VNQFRVPFAP FTGVNHHGQT 300 ILFGCALLLD ESEASFVWLF KTFLTAMNDR QPVSITTDQD RAIHVAVAQV FPQARHCISK 360 WHVLREGQQK LAHVCLTHPN FQVELYNCIN LTETIEEFES AWNCIIEKYN LGRNDWLQSL 420 YNARAQWVPV YVRDSFFAVI SPNQGYDNSF LDGYVNQQTT LPLFFRQYER ALENWFEKEV 480 EADFDTMCTT PVLRTPSPME KQAANLYTRK IFAKFQEELV ETFVYTANRI EGDAALSTFR 540 VAKFEDDQKA YVVTLNYPDM RANCSCQMFE YSGILCRHVL TVFTVTNVLT LPPHYILKRW 600 TRNARSGXGL DERAIELHGQ ESLLSRFNNL CREAIRYAEE GATAVETCNV AITALKEAAK 660 KVAIAKKNVA KVAPPSSQVS GAGYDERKTS ASASDTTPLL WPRQDEVMRR FNLNDAGASV 720 QSIGDLNYPH IAPVTLHRDD NPPDHMAVLP YLKSMTWVME NKNSTTGNRV AVINLKLQDY 780 SRSPSAESEV KFQLSRVSLE PMLRSMAYIS EQLSTPANKV AVINLKLQDT ETTSGESEVK 840 FQVSRDTLGA MLRSMAYIRE QLSNPAEIQS EPLPKKQRK

Sequence ? help Back to Top

Protein Sequence Length: 879 aa Download sequence

MDEVVEVDGM THPAVVDDSD VDPHEGEINT GEDSTLHDED GIIEPYVGME FESEGDAKTF  60
YDEYARRYGF SSKLGQLSRA KSDGTIIARD FVCGRECSKR KSADSCDAML RIEFKDQDKW  120
VVTKFVKEHS HSTGNSNKVH YLRPRRHFAG AAKTMTETAY AGSAGVPSGV MSVLMDDNRI  180
PAEKNCGVRS ASQAEANRSI NNASTINYGI RNAGRKRTLG RDAQNMLEYF KKMQSENPGF  240
FYAIQLDEDN RMANVFWADA RSRAAYSNFG DAVTLDTMYR VNQFRVPFAP FTGVNHHGQT  300
ILFGCALLLD ESEASFVWLF KTFLTAMNDR QPVSITTDQD RAIHVAVAQV FPQARHCISK  360
WHVLREGQQK LAHVCLTHPN FQVELYNCIN LTETIEEFES AWNCIIEKYN LGRNDWLQSL  420
YNARAQWVPV YVRDSFFAVI SPNQGYDNSF LDGYVNQQTT LPLFFRQYER ALENWFEKEV  480
EADFDTMCTT PVLRTPSPME KQAANLYTRK IFAKFQEELV ETFVYTANRI EGDAALSTFR  540
VAKFEDDQKA YVVTLNYPDM RANCSCQMFE YSGILCRHVL TVFTVTNVLT LPPHYILKRW  600
TRNARSGXGL DERAIELHGQ ESLLSRFNNL CREAIRYAEE GATAVETCNV AITALKEAAK  660
KVAIAKKNVA KVAPPSSQVS GAGYDERKTS ASASDTTPLL WPRQDEVMRR FNLNDAGASV  720
QSIGDLNYPH IAPVTLHRDD NPPDHMAVLP YLKSMTWVME NKNSTTGNRV AVINLKLQDY  780
SRSPSAESEV KFQLSRVSLE PMLRSMAYIS EQLSTPANKV AVINLKLQDT ETTSGESEVK  840
FQVSRDTLGA MLRSMAYIRE QLSNPAEIQS EPLPKKQRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	0.0	FAR1 family protein