PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022157265.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family WRKY
Protein Properties Length: 298aa    MW: 33503.2 Da    PI: 6.5046
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022157265.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY741.9e-23120181159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     +dDg +WrKYGqK++ +++fpr+YYrCt++   +C+++k+v++ +edp  + +tY g+H ++
  XP_022157265.1 120 VDDGQAWRKYGQKVILNAKFPRNYYRCTHKydqSCQATKQVQQVEEDPPKFRTTYYGHHSCT 181
                     58***************************99999*************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MDCWSMAFDR RRAADELLQG RELAHQLRVV LRRISSHGAA SASASQDLIS GILNSFSKTL  60
SMLNHRCDSD DINGSIVDSP DATKSQEESG ETNSKTSDRR GCYKRRKSSH SWTRESCSLV  120
DDGQAWRKYG QKVILNAKFP RNYYRCTHKY DQSCQATKQV QQVEEDPPKF RTTYYGHHSC  180
TNFLRASEIV LGLGQDQGEG SSDFKGLLLR FDSPTTTTTQ LPQLQHDRGL FIHPSFPDID  240
IANATTVIKK EKDHGIIGTD DVCSPSNYIA AELSPDHLSE VMMGSVVDFE DDVLQFHF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.11e-36WRKY family protein