PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022157129.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family ERF
Protein Properties Length: 265aa    MW: 29289.9 Da    PI: 7.3872
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022157129.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP223.51.4e-0795133250
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaar 50 
                     ++ GVr+++ +g+W +    +     r r + g+++t  e + aa ++r
  XP_022157129.1  95 KFLGVRRRP-WGKWDSG---C-----RIRLWFGTYDT-AEDKNAAMKFR 133
                     678******.*****88...4.....57*********.*******9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MDVPTNLRRK PTTKPPENSA GSRIVRISIT DPDATDSSSD DEPAMLLTRR RLKCYVDEVT  60
IETAETGGGR RKRTANGLVR RRRRMKKKSP GNVGKFLGVR RRPWGKWDSG CRIRLWFGTY  120
DTAEDKNAAM KFRGPAVLTN FPTPPPPPPF PGEDSSSSPT SVLHYGTHFT ESKPEPPPCR  180
TTATFGVVAE SPVVDFPCSD DIFKSILFES PLFFDYQTNL VPETPWTDGS SGEFLYSAAA  240
GSGQGGEEHD FFEEILMGSD PLVVL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17082RRKRTANGLVRRR
27084RRKRTANGLVRRRRR
37986VRRRRRMK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53290.13e-16ERF family protein