PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022156850.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 241aa MW: 27424.2 Da PI: 8.1386 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 35.4 | 1.9e-11 | 71 | 121 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 h +Er+RR+++ + ++ Lr llP+ +K s + ++v+YI+++q XP_022156850.1 71 IIHRDVERQRRQEMSTLYAALRALLPPdY---LRGKRSICDHMHETVKYIQHMQ 121 5699***********************66...9********************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 241 aa Download sequence |
MEFNIQSPLS FEVVEELLPL PSLSCVDIAV PQLPAAHNLS DIILSQSPKY GRRRKEPPVF 60 AGDENNKKKK IIHRDVERQR RQEMSTLYAA LRALLPPDYL RGKRSICDHM HETVKYIQHM 120 QTKIQELSQK RDELKKHAKQ NSDHETTETP STTRKDTIVV RKKHGGVQVV LDTATTRRRP 180 VSSILEALIA EGLQIASCIS TKINDRFLHT IESEAADDSN PSVDVSELHH KLTNLENFPL 240 D |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 52 | 70 | RRRKEPPVFAGDENNKKKK |
2 | 53 | 71 | RRRKEPPVFAGDENNKKKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G25410.1 | 4e-35 | bHLH family protein |