PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022156579.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family NAC
Protein Properties Length: 306aa    MW: 35106.3 Da    PI: 7.273
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022156579.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM176.47.8e-55131411128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     +ppGfrFhPt+eelv +yLk+k++++k++l +vi ++d+yk+ePwd+++     ++e+kewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk+v
  XP_022156579.1  13 VPPGFRFHPTEEELVGYYLKRKINSQKIDL-DVIVDIDLYKMEPWDIQAsckFGYEEQKEWYFFSHKDRKYPTGTRTNRATSAGFWKATGRDKAV 106
                     69****************************.99**************953432234677************************************ PP

             NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +s k++ +g++ktLvfykgrap+g+ktdW+mheyrl
  XP_022156579.1 107 VS-KNRMIGMRKTLVFYKGRAPNGRKTDWIMHEYRL 141
                     **.8899***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MKSSSMEILE SCVPPGFRFH PTEEELVGYY LKRKINSQKI DLDVIVDIDL YKMEPWDIQA  60
SCKFGYEEQK EWYFFSHKDR KYPTGTRTNR ATSAGFWKAT GRDKAVVSKN RMIGMRKTLV  120
FYKGRAPNGR KTDWIMHEYR LQTSELAPPQ EEGWVVCRAF KKPSPNQNQS IGAWNGPYHH  180
QQQAFYDLKN NTTEFVRSPS FSGAMTSSHL LNNSDQLPYA SDQQQHFLPA YDVNQLVQLP  240
SLESPTLSPS FGTNETKINN NHDHGPCPEW NVDLMNDLLS SSSNYPNLPQ TCELQAHNPC  300
GFGNFC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.15e-98NAC family protein