PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022156450.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 294aa MW: 33156.8 Da PI: 5.2578

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022156450.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.8	7.7e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l++ + G +W+++++ g++R++k+c++rw +yl XP_022156450.1 14 KGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	42.6	1.4e-13	70	146	4	47
S-HHHHHHHHHHHHHTTTT..................................-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg..................................tWktIartmgkgRtlkqcksrwqky 47 T+ E++l +d++++lG+ W++Ia++++ gRt++++k++w+++ XP_022156450.1 70 LTEAEEQLVIDLHARLGNSnvweedklqskafnlgtaetsasnpnfaswpsntIWSKIAARLP-GRTDNEIKNHWNTH 146 699*************9****************************************.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence
MGRQPCCDKL GVKKGPWTAE EDKKLINFIL TNGQCCWRAV PKLAGLRRCG KSCRLRWTNY 60 LRPDLKRGLL TEAEEQLVID LHARLGNSNV WEEDKLQSKA FNLGTAETSA SNPNFASWPS 120 NTIWSKIAAR LPGRTDNEIK NHWNTHIKKK LLKMGIDPVT HEPIKKQPEE TTDQSPKANT 180 NNAKKENSGE NDSVLENSSS SPATENSSSA ATDDSLLLEN LYNTSSNFWI EEEALWNNHN 240 PPAANGANNF VWEENNCSWL LDCEDFGIHD FGFDFFNDFE SNNAINTTEM EGKH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G22680.1	1e-81	MYB family protein