PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022155842.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 695aa MW: 76722.1 Da PI: 6.3703

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022155842.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.5	0.00055	526	563	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R+ i +++ eLrel+P+ a K s + Le++++++ Lq XP_022155842.1 526 RQLIQDRIKELRELVPNgA------KCSIDSLLERTIKHMLFLQ 563 67799************77......7777779999999999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 695 aa Download sequence
MGTTDLHQIL KSLCCNSEWK YAVFWKLKHR ARMVLTWEDG YYDNSEQHDP PESKFFRKTL 60 EKFHDGHFSH DPLGLAVAKM SYHVYSLGEG IVGQVAVTGK HQWITADEQI PNFSSTLEYC 120 DGWQTQFSAG IKTIVVVAVV PHGVLQLGSL DKVTEDINLV TRIRNIFLTL QESSAGHIKP 180 MHSCTSSGYM ADISTKSLVT EKNEVEMVSK SVGIELSGSG GNESLKTKPD ATIVQGLKSQ 240 VRSIDDRMCV GEPSGCKDMA VGLKHKVHVR LQNSTMDMVN ICGNLLPAEK IMTNDACFPM 300 NSHASSACDG VNHNGMLRRT NPTEMCLEND VEALEIRNET DMYPSNTSLK FPAGYELHEV 360 LGPAFLKDAL YLDWQVEYGF GSKAFELSEG MSGSQLTSDS PMERLLEAVV ADVCHSGSDV 420 KSNTSLCKSG QSLLTTERIP EPSTNITTSA CSEGYSMGQS QSSFIGEDMQ NSLSSSGVCG 480 VMSPKGFSST YSGTGSEHLE RSSEPAKNNK RRAKPGESCR PRPRDRQLIQ DRIKELRELV 540 PNGAKCSIDS LLERTIKHML FLQGITKHAD KLNKCANMKL HQKENGMLGS SNNDQGSSWA 600 VEVGGQLKVC SIIVENLNKN GQILVEMLCE ECSHFLEIAE AIRSLGLTIL KGITEAHGEK 660 TWICFVVEGE NNRSIHRMDI LWSLVQILQR SNNTM

Sequence ? help Back to Top

Protein Sequence Length: 695 aa Download sequence

MGTTDLHQIL KSLCCNSEWK YAVFWKLKHR ARMVLTWEDG YYDNSEQHDP PESKFFRKTL  60
EKFHDGHFSH DPLGLAVAKM SYHVYSLGEG IVGQVAVTGK HQWITADEQI PNFSSTLEYC  120
DGWQTQFSAG IKTIVVVAVV PHGVLQLGSL DKVTEDINLV TRIRNIFLTL QESSAGHIKP  180
MHSCTSSGYM ADISTKSLVT EKNEVEMVSK SVGIELSGSG GNESLKTKPD ATIVQGLKSQ  240
VRSIDDRMCV GEPSGCKDMA VGLKHKVHVR LQNSTMDMVN ICGNLLPAEK IMTNDACFPM  300
NSHASSACDG VNHNGMLRRT NPTEMCLEND VEALEIRNET DMYPSNTSLK FPAGYELHEV  360
LGPAFLKDAL YLDWQVEYGF GSKAFELSEG MSGSQLTSDS PMERLLEAVV ADVCHSGSDV  420
KSNTSLCKSG QSLLTTERIP EPSTNITTSA CSEGYSMGQS QSSFIGEDMQ NSLSSSGVCG  480
VMSPKGFSST YSGTGSEHLE RSSEPAKNNK RRAKPGESCR PRPRDRQLIQ DRIKELRELV  540
PNGAKCSIDS LLERTIKHML FLQGITKHAD KLNKCANMKL HQKENGMLGS SNNDQGSSWA  600
VEVGGQLKVC SIIVENLNKN GQILVEMLCE ECSHFLEIAE AIRSLGLTIL KGITEAHGEK  660
TWICFVVEGE NNRSIHRMDI LWSLVQILQR SNNTM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.2	1e-135	bHLH family protein