PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022155288.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 220aa MW: 24889.8 Da PI: 8.61

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022155288.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.3	4.6e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +grWT+eEd +l+ ++ G g+W++ ++ g+ R++k+c++rw +yl XP_022155288.1 14 KGRWTEEEDARLKTYILANGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	53	7.8e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ TteE++ +++++ G++ W++Ia++++ gRt++++k++w+++l XP_022155288.1 67 RGNITTEEEDTIIKLHSSIGNR-WSLIASHLP-GRTDNEIKNYWNSHL 112 7999****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 220 aa Download sequence
MGRRPCCEKV GLRKGRWTEE EDARLKTYIL ANGEGSWRSL PKNAGLLRCG KSCRLRWINY 60 LRSDLKRGNI TTEEEDTIIK LHSSIGNRWS LIASHLPGRT DNEIKNYWNS HLSRQIHTFR 120 RQNSADTGRI IIDVARLNLP PRRKGGRSRR SNRPVEIGGD LFADCNSTTS SFCLDSPWDW 180 ESLAGGHRIW EWDAADPDAG EAEAGAAESD AVISWLLSES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47460.1	1e-69	MYB family protein