PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022155118.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB_related

Protein Properties

Length: 672aa MW: 74687.1 Da PI: 9.0413

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022155118.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.3	1.5e-07	573	622	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ E e lv+av++lG+g+W+ + + k+Rt ++k++w ++ XP_022155118.1 573 RRPFSVAEVEALVQAVEKLGTGRWRDVKLRAFdnaKHRTYVDLKDKWKTL 622 6789999*****************9988889************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 672 aa Download sequence
MVLQKRLDYG FHGYQVPTMP RATRSARKRS ICRRGTEGSQ MRAFDLLATV ADKLLHGTDG 60 PTAPTDTATE RDRYVVMNKE LDADSSLKIE PSDRGSCDRS FVSDLVLSSH DKKCDSKDCL 120 PQHDEHSSQL ASVVMNFDKS KNEMGILASE VHVGSPGSKE SDNCELEGKN KVTVKYELHK 180 TEEMLTETQD EDDSCKREDP VIWDQKAHMS GTSLGCGKIT HNKQIVKNSS FATQNNVKVV 240 DRDDDENSSG CTHPVSTIKS FRTVPSSRDR RIRKVSASKS WKVVPRYRDE SLSKTDGIWK 300 SMFRSKSSHD SCRRQKSQMN IPFKKRKFFE CSNSVSNSDG GINSEGLSDS TGKVVKTDTS 360 GRSCSASGQG HHKSLQSKDS HVKIRIKSFR VPELFIEIAE TATVGSLKRT VMEAVTAILG 420 GGLRVGVLLQ GKKVRDDDKT LFQTGISHDN QLDSLGFALE PNPSRTPLAL CQEDSPCMVP 480 CDSPEPLTRY SPDASADHPG SSNVLPEPHG GILGNFIESD HDSAPSPTDT SNHKSTTDSK 540 ALVAVPAMTV EALAMVPMHR KSKRSEVAQR RIRRPFSVAE VEALVQAVEK LGTGRWRDVK 600 LRAFDNAKHR TYVDLKDKWK TLVHTARISP QQRRGEPVPQ ELLDRVLTAH AYWSKQQAKY 660 QLKRQPETCL LL

Sequence ? help Back to Top

Protein Sequence Length: 672 aa Download sequence

MVLQKRLDYG FHGYQVPTMP RATRSARKRS ICRRGTEGSQ MRAFDLLATV ADKLLHGTDG  60
PTAPTDTATE RDRYVVMNKE LDADSSLKIE PSDRGSCDRS FVSDLVLSSH DKKCDSKDCL  120
PQHDEHSSQL ASVVMNFDKS KNEMGILASE VHVGSPGSKE SDNCELEGKN KVTVKYELHK  180
TEEMLTETQD EDDSCKREDP VIWDQKAHMS GTSLGCGKIT HNKQIVKNSS FATQNNVKVV  240
DRDDDENSSG CTHPVSTIKS FRTVPSSRDR RIRKVSASKS WKVVPRYRDE SLSKTDGIWK  300
SMFRSKSSHD SCRRQKSQMN IPFKKRKFFE CSNSVSNSDG GINSEGLSDS TGKVVKTDTS  360
GRSCSASGQG HHKSLQSKDS HVKIRIKSFR VPELFIEIAE TATVGSLKRT VMEAVTAILG  420
GGLRVGVLLQ GKKVRDDDKT LFQTGISHDN QLDSLGFALE PNPSRTPLAL CQEDSPCMVP  480
CDSPEPLTRY SPDASADHPG SSNVLPEPHG GILGNFIESD HDSAPSPTDT SNHKSTTDSK  540
ALVAVPAMTV EALAMVPMHR KSKRSEVAQR RIRRPFSVAE VEALVQAVEK LGTGRWRDVK  600
LRAFDNAKHR TYVDLKDKWK TLVHTARISP QQRRGEPVPQ ELLDRVLTAH AYWSKQQAKY  660
QLKRQPETCL LL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07540.1	1e-134	MYB_related family protein