PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022154851.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

WRKY

Protein Properties

Length: 424aa MW: 46881.1 Da PI: 7.9558

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022154851.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	107.2	8.1e-34	83	140	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers d++++ei+Y+g+Hnh+k XP_022154851.1 83 DDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSL-DGQITEIVYKGSHNHPK 140 8**************************************.*************85 PP
2	WRKY	106.1	1.8e-33	259	317	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct +gCpv+k+ver+++d ++v++tYeg+Hnh+ XP_022154851.1 259 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCPVRKHVERASHDLRAVITTYEGKHNHD 317 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
MFQPSSNTVP TTQGWSFQEQ SKKHDGYSSE KNMVKPEFGS MQSFSPEYGV VQKQSQNGGG 60 EQLQSEYGNN YAQQSQTVNR RSDDGYNWRK YGQKQVKGSE NPRSYYKCTF PNCPTKKKVE 120 RSLDGQITEI VYKGSHNHPK PQSTRRSSLS SGGGSSHSMT ASNPAANDIA DQSYATQGSG 180 QFDGVATPEN SSISIGDDDF DRSSQKSKSG GGDDFDEDEP EAKRWRREGD NNEGISAAGS 240 RTVREPRVVV QTTSDIDILD DGYRWRKYGQ KVVKGNPNPR SYYKCTNPGC PVRKHVERAS 300 HDLRAVITTY EGKHNHDVPP ARGSGSHSLS RPFLNNDHPA AAIRPSAVAH QPNNGGNSLV 360 HGLQTPFTLE MVQNPNGFSF PEFGNSMGMG MGSYTNQTQP NDNLFARAKE EPREHDMFIQ 420 SLLC

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

MFQPSSNTVP TTQGWSFQEQ SKKHDGYSSE KNMVKPEFGS MQSFSPEYGV VQKQSQNGGG  60
EQLQSEYGNN YAQQSQTVNR RSDDGYNWRK YGQKQVKGSE NPRSYYKCTF PNCPTKKKVE  120
RSLDGQITEI VYKGSHNHPK PQSTRRSSLS SGGGSSHSMT ASNPAANDIA DQSYATQGSG  180
QFDGVATPEN SSISIGDDDF DRSSQKSKSG GGDDFDEDEP EAKRWRREGD NNEGISAAGS  240
RTVREPRVVV QTTSDIDILD DGYRWRKYGQ KVVKGNPNPR SYYKCTNPGC PVRKHVERAS  300
HDLRAVITTY EGKHNHDVPP ARGSGSHSLS RPFLNNDHPA AAIRPSAVAH QPNNGGNSLV  360
HGLQTPFTLE MVQNPNGFSF PEFGNSMGMG MGSYTNQTQP NDNLFARAKE EPREHDMFIQ  420
SLLC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-113	WRKY family protein