PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022154229.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB_related
Protein Properties Length: 1164aa    MW: 129791 Da    PI: 4.4692
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022154229.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.11.2e-0911001157147
                       TSSS-HHHHHHHHHHHHHTTTT.......-HHHHHHHHT....TTS-HHHHHHHHHHH CS
  Myb_DNA-binding    1 rgrWTteEdellvdavkqlGgg.......tWktIartmg....kgRtlkqcksrwqky 47  
                       +++WT+eE+e l ++v+++ +         Wk+I +       kgRt  ++k++w+++
   XP_022154229.1 1100 KLPWTAEEEETLREGVRKFSSSvdrsptiPWKKILEFGStvflKGRTSIDLKDKWRNL 1157
                       689*****************99*************9888*****************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 1164 aa     Download sequence    
MENEPESASG LAWRLTIEAL ASFNQVKPSL LHDVIEKASE LSDDARKNAG EMVALRCLEG  60
LFGSLNDVRE DSPPAHQSKV TFDSSESCEY VVKRIYKETP KSALRVAGPE MLKWDVSPFI  120
AQKRASMRST LHQLKDTILD GTHPYVDFLK PKSGLVPVNK RDGIALNNDD RTELSRRLDS  180
SSPDSQGQKE KGKGSPLLLE DERRPPVADP SSSSLLTSER SRADHASEDE ASQLPGCDDG  240
FVNVKKPQES GLASENNENS GDNTSWNSDD HIELNRRLDS SSSDPQGRKE KISKSLPFLE  300
DERRPSVAEP SSSSLLPSKR SRVDHASEDE ASQFPGCDDG FMNVKKLQKS GLASENNENN  360
GDNTSWNSDD HIELNRRLDS SSSDPQGRKE KISKSPLLLE DERRPSVADP SSSSLLPSKR  420
SRVYHASEDE ASQLPGCDDD FMNVKKLQKS GLAFETSENN RDRISLNNDD HIEVSRRLDS  480
SSSNPQGRKE KINGSPLLLE DKRRPSGADP SSSSLLRSQK SRVDHASEDE ASQLPGCDDG  540
YLNLNKLNQH SARTLYSGQE VASSHGTELL EDSTERVVPQ NEGDDNPLDE CTMTLVVEDK  600
LADEEHFGPK RSEPCTATDE LHQAESGIPC HTMPARVQDD EMHEIISVEK VNDRSVLPSE  660
PKASNSSCAE GNMHNNRIDD SKCDSGHDNH VNAINTMSHS EFWPETVATD IDVGMNPDEE  720
EKDMLSDSDG HLNDTIDIAM KKNEFFSSQC VVDHDSFPLA DRKELTVCVK CNEGGQLLSC  780
NISDCSLVVH DKCLGFSARM NDEGDFCCPF CFYSLAISEY LEAKENAALA KKNVATFIRI  840
GLEHQSIFIK EVLQRKDLGP SRKAGVEDVA KICEDVNLEN KDNQVTLDGE HVNEVIDHQS  900
PKGTDIERTA KLSKPLQISN SNHRENEANP LRVAPDVLAG EKDGDELVDQ ECEGNTVEEF  960
VDQECEGNTV KELVDQECQG NTVEELVDQE WQGNTVEELV DQECQGNVAE LEDGLKATEQ  1020
YDIYEFIHED QGPVEAVTKQ EGLRYQTDDN DEEPVYAINI EGEKSSDDEN DESIISRYSI  1080
RFRQEYHRTC PETPQSRRKK LPWTAEEEET LREGVRKFSS SVDRSPTIPW KKILEFGSTV  1140
FLKGRTSIDL KDKWRNLCRS PKFK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17520.13e-08MYB_related family protein