PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022153723.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

Trihelix

Protein Properties

Length: 443aa MW: 50640 Da PI: 8.4767

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022153723.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	82.7	4.8e-26	115	210	1	84
trihelix 1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfd 83 +Wt+++v++Li++ ++m++++ +g+ +kk++W++vsk m+erg+++sp+qC++k+++lnkryk+++++ +++ +++++ + +++d XP_022153723.1 115 KWTDKMVKLLITVISYMGDDSASGCgglgrrrlavlQKKGKWKSVSKIMAERGYHVSPQQCEDKFNDLNKRYKRLNDMLGRGtSCQVVDNPALLD 209 7*********************999999999999*********************************************95588887777766 PP trihelix 84 q 84 XP_022153723.1 210 G 210 5 PP

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence
MESNLTKRGM IPGGVSYGGV DLQGSMGVHH QGQYSLNLCQ ENHNRSHQRS SVRSLVRGSS 60 PLTMGSSQHC NHRARLVDCG KGDIKNSVSD EDEPSFSEEG IDGAGKNALP WQRVKWTDKM 120 VKLLITVISY MGDDSASGCG GLGRRRLAVL QKKGKWKSVS KIMAERGYHV SPQQCEDKFN 180 DLNKRYKRLN DMLGRGTSCQ VVDNPALLDG IDYLTAKEKD EVRKILSSKH LFYQEMCSYH 240 NGNRLHLPHD PELLHSLQLV LRNRIDCEND DLRKLGHEDF DEDECDMETD ARGDFEENRA 300 SHENNRGLSG TTGGCMKRVR QGLGYEEGNL MHSLTSNDYN NRSHCQAEAV RVGTNHVLPE 360 TRRIFQLQKL WIESRSLQLE EKRLQIQTDR LELEKQRFKW ERFNKKRDRE LEKLKLENER 420 MKLENEQMAS QLKQKGKGGA SLK

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence

MESNLTKRGM IPGGVSYGGV DLQGSMGVHH QGQYSLNLCQ ENHNRSHQRS SVRSLVRGSS  60
PLTMGSSQHC NHRARLVDCG KGDIKNSVSD EDEPSFSEEG IDGAGKNALP WQRVKWTDKM  120
VKLLITVISY MGDDSASGCG GLGRRRLAVL QKKGKWKSVS KIMAERGYHV SPQQCEDKFN  180
DLNKRYKRLN DMLGRGTSCQ VVDNPALLDG IDYLTAKEKD EVRKILSSKH LFYQEMCSYH  240
NGNRLHLPHD PELLHSLQLV LRNRIDCEND DLRKLGHEDF DEDECDMETD ARGDFEENRA  300
SHENNRGLSG TTGGCMKRVR QGLGYEEGNL MHSLTSNDYN NRSHCQAEAV RVGTNHVLPE  360
TRRIFQLQKL WIESRSLQLE EKRLQIQTDR LELEKQRFKW ERFNKKRDRE LEKLKLENER  420
MKLENEQMAS QLKQKGKGGA SLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	1e-132	Trihelix family protein